Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01745 ATGGCTGAAAATGAAGAAGAAAAAGTGAAGCTTTTGGGAGTTGTTGGAAGCCCATTTGTTTACAGGGTGCAGCTTGCTCTGAAACTGAAGGGAGTCCAATATGAACTCTTGGAAGAAAATTTGGAGCACAAGAGCCAACTCCTTCTCAAATACAACCCTATTCATAAAAAGGTTCCTGTGCTTGTTCACGATGAGAATCCCATAACGGAGTCCCTTGTGATTCTTGAATATATAGAGGAGACATGGAAAGGGAACCCCATCTTGCCTCAAGAACCTTATTCAAGAGCCTTGGCTCGTTTCTGGACCAAGTTCATTGATGAAAAGTGCATGTCTACTATATGGAAAACTGCAACGACCTTAGATGAGAAAGAGCGTGAGAAGGCTATCGAAGAATCGCACGAGGTGCTTCAGATTCTTGAGAATGAGCTTAAGGACAAATTCTTTGGTGGAGAAACATTAGGGTTGGTGGACATTGTTGGAACTTGCGTAGCTTTTTGGCTCCCAGCGATTGAACAAATTGTGGGGTTGGAGTTGCTGACAAGTGAGAAATTCCCAAAGCTATACAACTGGACTCACCAAGTGCTCAACCATCCCTTTGTTAAAGAAACTCTGCCACCTAGAGAACCATTTCTTGCTGCCTTCAAAGCTCGCATTCAAATCCTTACTCCTTCAAAATAG 678 0.4292 MAENEEEKVKLLGVVGSPFVYRVQLALKLKGVQYELLEENLEHKSQLLLKYNPIHKKVPVLVHDENPITESLVILEYIEETWKGNPILPQEPYSRALARFWTKFIDEKCMSTIWKTATTLDEKEREKAIEESHEVLQILENELKDKFFGGETLGLVDIVGTCVAFWLPAIEQIVGLELLTSEKFPKLYNWTHQVLNHPFVKETLPPREPFLAAFKARIQILTPSK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01745 225 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Cca01g01745 225 SUPERFAMILY GST C-terminal domain-like 80 220 IPR036282 -
Cca01g01745 225 SFLD Glutathione Transferase (cytosolic) 5 219 IPR040079 -
Cca01g01745 225 SFLD Main.3: Omega- and Tau-like 5 219 IPR045073 -
Cca01g01745 225 Gene3D Glutaredoxin 1 90 - -
Cca01g01745 225 CDD GST_N_Tau 9 82 - -
Cca01g01745 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 224 IPR010987 -
Cca01g01745 225 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 6 219 - -
Cca01g01745 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Cca01g01745 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 219 IPR045073 -
Cca01g01745 225 SUPERFAMILY Thioredoxin-like 8 109 IPR036249 -
Cca01g01745 225 Pfam Glutathione S-transferase, C-terminal domain 119 198 IPR004046 -
Cca01g01745 225 CDD GST_C_Tau 92 217 IPR045074 GO:0004364|GO:0006749
Cca01g01745 225 Gene3D - 91 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01745 Cca-Chr1 40813148 40816469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01745 4 224 Glutathione S-transferase Gene Family AT3G09270 51.786 6.81e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01745 K00799 - gmx:100807613 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01745 01 40813148 40816469 Cca01g01745 01 40813148 40816469 ECH