Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01744 ATGGCCAAAGATTATGGAGAGGTTAAGTTTTTTGGTACGGTTGGAAGCCCCTTTGCTAAGAGGGTGCAGATTGCCCTAGACCTGAAGGGAGTGCAATACACTTACTTTGAAGAAGATCTTAGGAACAAGAGTGAACTTCTTCTGAAATACAACCCTATTCACAAGAAGGTGCCTGTGCTTGTCCACAAAGGAAGACCCTTGGCTGAGTCCCTTGTGATCCTTGAATACATTGATGAGATATGGGGGAGCAACCACCCCTTGTTGCCTCAACAACCCTATGATAAAGCCTTGGCTCGCTTCTGGTCAAGGTTCATTGATGACAAATGCCTGCCAGCAATATTAAAGGCCGCATTTACTGCAAACAAGGAAGAACGTGAGAAGGGCAGTGAGGAATCACTGGAGGCTCTTGAGTACCTAGAGAATGAACTGAAAGACAAGTTCTTTGGTGGAGAGAGTATTGGCCTTGTGGACATAGCCGCAAGCTATTTAGCTTTTTGGCTCCCTGCGATCGAAGAGGCTGTGGGGTTGAAGTTGTTGACTTCTGACAAGTTCCCAAAGCTTCATAAATGGGGTCAAGAATTCACCAACCACCCTGTTGTGAAAAAGACCCTGCCCCAAAGGGAGAAAGTTGTGGGCTTCTTCAAAGCTCGATATGCATCCATCATTGCTGCTTCCAAATAG 681 0.4611 MAKDYGEVKFFGTVGSPFAKRVQIALDLKGVQYTYFEEDLRNKSELLLKYNPIHKKVPVLVHKGRPLAESLVILEYIDEIWGSNHPLLPQQPYDKALARFWSRFIDDKCLPAILKAAFTANKEEREKGSEESLEALEYLENELKDKFFGGESIGLVDIAASYLAFWLPAIEEAVGLKLLTSDKFPKLHKWGQEFTNHPVVKKTLPQREKVVGFFKARYASIIAASK 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01744 226 CDD GST_N_Tau 8 81 - -
Cca01g01744 226 SFLD Main.3: Omega- and Tau-like 6 224 IPR045073 -
Cca01g01744 226 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Cca01g01744 226 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 221 - -
Cca01g01744 226 Gene3D - 91 225 - -
Cca01g01744 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Cca01g01744 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 221 IPR045073 -
Cca01g01744 226 Gene3D Glutaredoxin 1 90 - -
Cca01g01744 226 Pfam Glutathione S-transferase, C-terminal domain 108 198 IPR004046 -
Cca01g01744 226 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Cca01g01744 226 SUPERFAMILY Thioredoxin-like 8 109 IPR036249 -
Cca01g01744 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 213 IPR010987 -
Cca01g01744 226 SFLD Main (cytGST) 6 224 - -
Cca01g01744 226 CDD GST_C_Tau 92 217 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01744 Cca-Chr1 40806201 40807798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01744 8 223 Glutathione S-transferase Gene Family AT3G09270 50.459 1.73e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01744 K00799 - gmx:100819805 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01744 01 40806201 40807798 Cca01g01744 01 40806201 40807798 ECH