Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01724 ATGTGTTGGAATTTGCACCTTATTCTTCTACTTGCTCTTGCACTTTTCATACAGATATCATCTCAGCTTGGAACCTCTCGTTCAAAGGTAGAAGTGCTTCCTGGCTTTGAAGGGCCTCTTCCTTTTGAACTTGAAACAGGGTATGTGGGATTGGGAGAAAGAGATGATGATATGCAAGTATTTTATTATTTTATTAAGTCAGAGAACAACCCAGAAAAAGACCCTCTTATGCTTTGGCTAACTGGTGGTCCTGGTTGCTCTTCATTATCGGGTCTTCTCTTTCAAATAGGTCCATTTGCACTCGACACTGAGGCATATGATGGGAGCAGGCAAAATTTGATCTTGAGGCCACAGTCATGGACAAAGGTATGTAACATTATTTTTGTAGATTTGCCTTTCGGAACTGGCTTCTCGTATGCAAAAAATCTCACTGCTCACCGAAGTGACTGGAAATTAGTTCACCATATCCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCAGAATTTATTTCAAATGAATTTTACATGGGAGCTGATTCATATTCTGGCATTCCTACCCCTGCTGTTGTTCAAGAAATTTCAAATGGAAATGAAATAGGTCTCCAACCACGGATAAATATCCAGGGATATCTGCTAGGGAACCCCGTAACAACACGAAAAGAAAAAAATTATCAAATCCCATTTGCTCATGGAATGGGACTCATTTCTGATGAACTCTATGCGTCACTGCAGAGAAATTGTAAAGGAGAGTATATAGATGTTGATTCCAGAAATGAATTGTGTTTAAGAGATCTCAACTACTTTGATGAGTGCCTTTCAGAAATTAATTTATCGAACATTTTGATTGGATGTGCCAAAGATGATTATTTGCCTAAGAAACATGAAGCTCAGTGGAGGAGATCTCTGAATCAGAAGTTTGATGCCGCTCTTAGTTCTTATACAAGAGAGCATAACTTATGCCGCAGTATTTACAGTGATTTCTTTTCCGCTCAATGGGCCAATGATGAGAGTGTTCGCAAGTCGCTGCATATTCGAGAGGGAACTATAGGAAAATGGGAACGCTGTTACAAAACTGATTTTGAGTTTCAGATCTCTAGTAGCTTTGACATTCATGTAAATCTCAGTGCAAAAGGATATCGTTCGTTAATATACAGTGGGGATCATGACGTATTAGTGCCTTTCATGTCAACTCAAGCATGGATAAGGGCTTTAAACTATTCCATTGTGGAAGATTGGAGGCCATGGTTTGTAAAAGGTCAAGTTGCAGGATACACAAGAACTTACTCGAATCAAATGACTTTTGCAACTGTGAAGGGTTCAGGACACACAGTTTCCAGGTACACGCCCGAGGAAGGTTTTGGCATGTTCACAAGGTGGATAGCTAATTTACCTTTGTAA 1401 0.3969 MCWNLHLILLLALALFIQISSQLGTSRSKVEVLPGFEGPLPFELETGYVGLGERDDDMQVFYYFIKSENNPEKDPLMLWLTGGPGCSSLSGLLFQIGPFALDTEAYDGSRQNLILRPQSWTKVCNIIFVDLPFGTGFSYAKNLTAHRSDWKLVHHIHQFLRKWLIDHPEFISNEFYMGADSYSGIPTPAVVQEISNGNEIGLQPRINIQGYLLGNPVTTRKEKNYQIPFAHGMGLISDELYASLQRNCKGEYIDVDSRNELCLRDLNYFDECLSEINLSNILIGCAKDDYLPKKHEAQWRRSLNQKFDAALSSYTREHNLCRSIYSDFFSAQWANDESVRKSLHIREGTIGKWERCYKTDFEFQISSSFDIHVNLSAKGYRSLIYSGDHDVLVPFMSTQAWIRALNYSIVEDWRPWFVKGQVAGYTRTYSNQMTFATVKGSGHTVSRYTPEEGFGMFTRWIANLPL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01724 466 Gene3D alpha/beta hydrolase 32 465 IPR029058 -
Cca01g01724 466 SUPERFAMILY alpha/beta-Hydrolases 33 465 IPR029058 -
Cca01g01724 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Cca01g01724 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Cca01g01724 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Cca01g01724 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Cca01g01724 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 465 IPR001563 GO:0004185|GO:0006508
Cca01g01724 466 Pfam Serine carboxypeptidase 34 463 IPR001563 GO:0004185|GO:0006508
Cca01g01724 466 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 9 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01724 Cca-Chr1 40311588 40320102 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01724 26 53 Calmodulin-binding Proteins AT2G22960 71.429 1.23e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01724 K16296 - gmx:100780069 757.288