Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01717 TGGCTGATTGATCACCCGGAATTTCTTTTAAATGAATTTTACATCGGAGGTGATTCATATTCTGGCATACCTGTCCCTGGTATTGTTCAAGAAATTTCAAATGGAAATGAAATAGGTCTACAACCACAGATAAATCTCCAGGGATATCTATTAGGGAACCCAGTAACAACAGGAAAAGAAAATAATTATCAAATCTCATTTGCTCATGGAATGGGACTTATTTCAGATGAACTCTATGCGTCACTGCAGAGAAATTGTAAAGGAGAGTATATCGATATTGATTCCAGAAACGAATTGTGTTTAAGAGATATGAACTACTTTGAAGAGTGCCTTTCAGAAATTGATATGGGAAACATTTTGGAACACTGCTGCAAAGTTGATTTGCCTAAGAAACATGAAGCTCCGTGGAGGAGATATCTGTATCAAAAGTTTGAGGCCTCTCTTAATTCTTATTATACGAGAGAGCCAAACTTATGCTGCAATATTTTTAGTGACTTCATTTCCGCTCAATGGGCCAATGATGAGAGTGTTCGCAAGTCGCTGCATACTCGAGAGGGAACTATAGGCAAATGGGAACGCTGTTACAAAACTGATTTTAAGTTTCAGATCTCTAGTAGCTTCGACATTCATGTAAATCTTAGTGCAAAAGGATACCGTTCATTAATATACAGCGGAGATCATGATGCAGTTGTTCCTTTCATATCGACCCAAGCGTGGATTAGGGCTCTAAACTACTCCATTGTGGAAGATTGGAGGCCATGGCTTATAGAAGATCATGCATCAGAATCAGACCTTTACTCGTACACTTGCATGTGTTGGTCCAAGTGGGAAAATCGTGGGTCCCCTGAAGCATATGGGACCATGAGTTTGACCCAAAATTTATCTGCATTGAGAAAATACCGAATGATCTTATATTGGTATATAGTGTACGGGACATCATTAATGCTAGAAAAGGAGATGCACCTTCGTCAATCCCATTTTACCTAA 987 0.3891 WLIDHPEFLLNEFYIGGDSYSGIPVPGIVQEISNGNEIGLQPQINLQGYLLGNPVTTGKENNYQISFAHGMGLISDELYASLQRNCKGEYIDIDSRNELCLRDMNYFEECLSEIDMGNILEHCCKVDLPKKHEAPWRRYLYQKFEASLNSYYTREPNLCCNIFSDFISAQWANDESVRKSLHTREGTIGKWERCYKTDFKFQISSSFDIHVNLSAKGYRSLIYSGDHDAVVPFISTQAWIRALNYSIVEDWRPWLIEDHASESDLYSYTCMCWSKWENRGSPEAYGTMSLTQNLSALRKYRMILYWYIVYGTSLMLEKEMHLRQSHFT 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01717 328 Gene3D alpha/beta hydrolase 1 296 IPR029058 -
Cca01g01717 328 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 1 260 - -
Cca01g01717 328 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 1 260 IPR001563 GO:0004185|GO:0006508
Cca01g01717 328 Pfam Serine carboxypeptidase 1 264 IPR001563 GO:0004185|GO:0006508
Cca01g01717 328 SUPERFAMILY alpha/beta-Hydrolases 1 257 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01717 Cca-Chr1 40065886 40068445 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01717 167 285 Calmodulin-binding Proteins AT2G22960 46.667 2.07e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01717 K16296 - ccaj:109792682 695.656