Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01716 ATGATTTCTAACCTGTGTTGCCATTTTCTCATTATTCTTCTACTTGGTCTTGCAATTTTCGTTCGGGTCGGAACTTCTCGCTCCAAGGTGGAAGTGCTTCCCGGCTTTGAAGGACCTCTTCCTTTCGAACTGGAAACTGGTTATGTGGGATTGGGAGGAAAAGATGATGACATGCAAGTCTTTTATTACTTTATTAAGTCAGAGAGCGATCCTCAGAAAGACCCTCTTATGCTTTGGTTGTCAGGGGGTCCTGGTTGCTCTTCATTAACGGGTCTTCTCTTTCAAATAGGTCCACTTGCACTCGACACTGAGTCATATGATGGGAGCTTGCCAAATTTGATCTTGAGGCCACAGTCCTGGACTAAGGTATGTAGCATTATTTTTGTAGATTTGCCTTTTGGAAGTGGCTTCTCGTATGCAAAAAATCTCACTGCTCAACGGAGTGACTGGAAATTAGTTCACCATACCCATCAATTTCTTAGGAGGTGGCTGATTGATCACCCGGAATTTCTTTTAAATGAATTTTACATGGGAGGTGATTCATATTCTGGCATACCTGTCCCTGGTATTGTTCAAGAAATTTCAAATGGAAATGAAATAGGTCTGCAACCACAGATAAATCTCCAGGGATATCTGTTAGGGAACCCAAAAACAACAGGAAAAGAAAATAATCATCAAATCTCATTTGCTCATGGAATGGGACTTATTTCTGATGAACTCTATGCGTCACTGCAGAGAAATTGTAAAGGAGAGTATATCGATATTGATTCCAGAAACGAATTGTGTTTAAGAGATATGAACTACTTTGAAGAGGCAAAAATTGATATGTGGTACATTTTGGGACACTGCTGCAAAGTTGATTTGCCTAAGAAACATGAAGCTCCGTGGAGGAGATATCTGTATCAAAAGTTTGAGGCCTCTCTTAATTCTTATTATACGAGAGAGCCAAACTTATGCTGCAATATTTTTAGTGACTTCATTTCCGCTCAATGGGCCAATGATGAGAGTGTTCGCAAGTCGCTGCATACTCGAGAGGGAACTATAGGAAAATGGAAACGCTGTAACCAAACTGATTTTGAGTACCAGATCTCTAGTAGCTTCGACATTCATGTAAATCTTAGTGCAAAAGGATACCGTTCATTAATATACAGCGGAGATCATGATGCAGTTGTTCCTTTCATATCGACCCAAGCGTGGATTAGGGCTCTAAACTACTCCATTGTGGAAGATTGGAGGCCATGGCTTATAGAAGGACAAGTTGCAGGGTAG 1269 0.4082 MISNLCCHFLIILLLGLAIFVRVGTSRSKVEVLPGFEGPLPFELETGYVGLGGKDDDMQVFYYFIKSESDPQKDPLMLWLSGGPGCSSLTGLLFQIGPLALDTESYDGSLPNLILRPQSWTKVCSIIFVDLPFGSGFSYAKNLTAQRSDWKLVHHTHQFLRRWLIDHPEFLLNEFYMGGDSYSGIPVPGIVQEISNGNEIGLQPQINLQGYLLGNPKTTGKENNHQISFAHGMGLISDELYASLQRNCKGEYIDIDSRNELCLRDMNYFEEAKIDMWYILGHCCKVDLPKKHEAPWRRYLYQKFEASLNSYYTREPNLCCNIFSDFISAQWANDESVRKSLHTREGTIGKWKRCNQTDFEYQISSSFDIHVNLSAKGYRSLIYSGDHDAVVPFISTQAWIRALNYSIVEDWRPWLIEGQVAG 422
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01716 422 Pfam Serine carboxypeptidase 34 422 IPR001563 GO:0004185|GO:0006508
Cca01g01716 422 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 10 422 - -
Cca01g01716 422 SUPERFAMILY alpha/beta-Hydrolases 33 422 IPR029058 -
Cca01g01716 422 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 422 IPR001563 GO:0004185|GO:0006508
Cca01g01716 422 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Cca01g01716 422 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Cca01g01716 422 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Cca01g01716 422 Gene3D alpha/beta hydrolase 33 422 IPR029058 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca01g01716 Cca-Chr1 40045356 40051971 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01716 26 52 Calmodulin-binding Proteins AT2G22960 74.074 1.96e-06 46.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01716 K16296 - gmx:100780069 673.7