Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01715 ATGCGGTCATTGTCAACCCTGCCTACACCATTGGAAACATCAAGTTCACTATGTGTTTCTCACTCCTATGGCCTTGATGCACAACTTTTCATGACCTTGATCACTTCTTCTATCGCTGCATGGGTGAGGTTAAACAAACACTATGTGAATAGGTCTTGTACTCGTGTAATGTCTCTAAAAGAATGCTTTTCATTTGTCACCAAAGGCACCTCCCGTGTCAATAATTATTTGCGTTCAATACTATTGATAGAGGATGAATTTGCTTTTATTGGTCATCCTGTTGATGACCTTGATCTTGTCATTACCGCTCTCAACGGTCTTGGACCATCTTTTTGCGAATTCATAGCCTTAATTTGCACTAGACACATTCCTTTATTGTTTGATGAACTTTTTGACAAATTAGTAGATTTTAAAATTTTCATGCAACAGGATGAACGTCAACTACAATCTTTTCCTATCAATGCCAATTACACAAATATCTCTCAACGGTCAAATTGTAGCAAACAATATTTTTCATCAAATTGTATTAGCTCCTTGATCGAAGCCGTATCCATTTCACAAGGCAAACGGTATTTTGTTGTTGACAGCGGAGATCATGATGCAGTTGTTCCTTTCATATCGACCCAAGCGTGGATTAGGGCTCTAAACTACTCCATTGTGGAAGATTGGAGGCCATGGCTCATAGAAGATCATGCATCAGAATCAGACCTTTACTCGTACACTTGCATGTGTTGGTCCAAGTGGGAAAATCGTGGGTCCCCTGAAGCATATGGGACCATGAGTTTGACCCAAAATTTATCTGCATTGAGAAAATACCGAATGATCTTATATTGGTATATAGTGTACGGGACATCATTAATGCTAGAAAAGGAGATGCACCTTCGTCAATCCCATTTTACCTAA 903 0.392 MRSLSTLPTPLETSSSLCVSHSYGLDAQLFMTLITSSIAAWVRLNKHYVNRSCTRVMSLKECFSFVTKGTSRVNNYLRSILLIEDEFAFIGHPVDDLDLVITALNGLGPSFCEFIALICTRHIPLLFDELFDKLVDFKIFMQQDERQLQSFPINANYTNISQRSNCSKQYFSSNCISSLIEAVSISQGKRYFVVDSGDHDAVVPFISTQAWIRALNYSIVEDWRPWLIEDHASESDLYSYTCMCWSKWENRGSPEAYGTMSLTQNLSALRKYRMILYWYIVYGTSLMLEKEMHLRQSHFT 300
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01715 300 Pfam Serine carboxypeptidase 173 236 IPR001563 GO:0004185|GO:0006508
Cca01g01715 300 Gene3D - 139 272 - -
Cca01g01715 300 PANTHER - 34 169 - -
Cca01g01715 300 SUPERFAMILY alpha/beta-Hydrolases 137 228 IPR029058 -
Cca01g01715 300 Pfam gag-polypeptide of LTR copia-type 35 141 - -
Cca01g01715 300 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0278845-RELATED 34 169 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca01g01715 Cca-Chr1 40026824 40027726 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01715 124 231 Calmodulin-binding Proteins AT2G22960 36.111 1.54e-14 68.9