Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01696 ATGTTGGATTCGATTCTTGATTCTGATGCGCACATATATACTCACCTTTTTATCTTATTTTATTTATTTGGTGTGTCGTTGCTTTCTTTCGGCGCTCAGATCGCTTATTCCAGTGCTTCGAGACGCACGTGTGGTGTGGTGTGCTCTCAGATGACCATGGAGGAGAAGCCACTTTCGGAGAACAGAATGCTTGTGTATGTGCCTCCACATCCGTTGATCAAGCACTGGGTTTCAGTTCTTCGGAACGAGCAAACTCCTTGTCCCATCTTCAGAAATGCAATGGCTGAGCTGGGAAGGCTACTCATGTATGAAGCTTCAAGGGATTGGTTGCCCACTGTTTCTGGAGAGATTCAATCACCAATGGGTGTAGCCTCTGTGGAATTCATTGATCCAAGGGAGCCTGTGGCTGTAATTCCAATCTTGAGAGCAGGTCTTGCTCTTGCTGAACATGCTTCATCGATCTTGCCTGCAACAAAAACATATCATCTTGGAATAAGCAGAGATGAGGAAACTCTTCAGCCAACTATATATTTGAACAAGTTACCTGAGAAATTTCCAGAAGGATCTAAAGTTTTTGTGGTTGATCCTATGCTGGCTACAGGTGGTACTATAGTGGCTGCCCTGCATCTTTTAAAGGAACGTGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCTGTCTCTGCCCCTCCAGCTCTTCAGAAACTTAGCGAGCAGTTCCCTGGGCTTCATGTGTACACCGGAATAATTGATCCCGAAATAAATGAAAAAGGGTTCATAATTCCTGGCCTTGGAGATGCTGGGGATCGCAGTTTTGGTACAGATACATGA 831 0.4477 MLDSILDSDAHIYTHLFILFYLFGVSLLSFGAQIAYSSASRRTCGVVCSQMTMEEKPLSENRMLVYVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLALAEHASSILPATKTYHLGISRDEETLQPTIYLNKLPEKFPEGSKVFVVDPMLATGGTIVAALHLLKERGVGNKQIKVISAVSAPPALQKLSEQFPGLHVYTGIIDPEINEKGFIIPGLGDAGDRSFGTDT 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01696 276 TIGRFAM upp: uracil phosphoribosyltransferase 65 274 IPR005765 GO:0004845|GO:0006223
Cca01g01696 276 PANTHER URIDINE KINASE 35 270 - -
Cca01g01696 276 Pfam Uracil phosphoribosyltransferase 67 274 - -
Cca01g01696 276 CDD PRTases_typeI 130 250 IPR000836 -
Cca01g01696 276 SUPERFAMILY PRTase-like 65 273 IPR029057 -
Cca01g01696 276 Gene3D - 52 274 IPR029057 -
Cca01g01696 276 PANTHER URACIL PHOSPHORIBOSYLTRANSFERASE-LIKE 35 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01696 Cca-Chr1 39199192 39205675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01696 37 276 PRT Gene Family AT3G53900 75.417 6.78e-137 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01696 K00761 - gmx:100797953 473.396