Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01695 ATGAATAGATTGGTTCCTGGGAAGATACATCTTGTGTTAGAGTACTGTAAAGGGGGAGATCTCTCCATGTACATTCAACGCCATGGAAAGGTGCCAGAGGCAACTGCAAAGCATTTTATGCAGCAGCTGGCTGCTGGCCTACAAGTTCTTCGGGATAATAACCTTATTCATCGAGACCTGAAACCACAGAATCTTCTTCTTTCTCGGAATGATGAGAAGTCAGTGTTGAAGATTGCTGACTTTGGATTTGCAAGATCTCTGCAACCTCTGGGCCTTGCTGAAACCTTGTGTGGTTCACCACTCTACATGGCTCCAGAAATCATGCAACTACAGAAGTATGATGCTAAGGCAGATCTCTGGAGTGTTGGTGCAATCTTATTTCAGCTTGTTACAGGAAGAACACCATTCACTGGAAACAATCAAATACAGTTACTACAGAATATTATGAAATCAACAGAATTGCAGTTTCCGTCTGATAACCCTAGTCCGAGTTCTGAATGCAAAGACTTGTGTCAGAAATTGCTACGCCGGAATCCAGTTTGCAGGAATAGAAGTTCTTATGGGATTTGTTCTACTGTGTCTGACCCCTTGAGAAGAACTGAGGAAAATTATCAAGAAGATTGCTTGCCTTTCATTCTAGATGACGACTCTAGTGGCCCTGAGGGGAGTCCATCCTTTTCAAGGAAGAAGCCCTCAATTAAGTCTACCTATGGGTTTGATCTAAATGCTAAACTAGATAAAGCAGATTCAGCATCTCCTATTTCTAATAACGTAAATTGTACTTCTGGATTTGGTAGTTATACACAAAGATCTGAAAACAGTACTAATAGATTGGACAAACATAAAATTTCAAGAAATCTCACCGATCCTTTACAATCTCCAGAACAGATATTCACAAATCCTTATCAAAAAGTTACGGATTCACTAGAGAATATTGATCAAGAATATGTTCTGGTGTCTGGCCCCCCTATGGATGTTTCATCTTCTTCAGTGGGTGCTTCAAGGCCTAGCCATACTACATATCGGTCAGGTAGTTTACCCCAAGAGTCTTCTAGTACAATCAATAGACTAAGTGCTCCAATGCCAATAGTTGGTGTGCCTACCAATAGCATATGCCAGATTGGAAGTTCTGGGAGTCAGGATTCTGCTCCTGGGACTTCGCTTGGATCAATGGATACAGGTGATGAACAGCCATCAGCTCACTGCATGACAAGGGTGAAATCATTGCAACAGAGTGCATCTGCCATCACGGAATTAGTTAATGAAAAGGTGGAGTCAGGAAAGCATCTAGAAGCGTTTTCTATTCAGCTTGTAATTCTTGCCATTTGGAAGCAAGCACTGCACATATGCCACACGCAAGCTGCCTCAGCAATGGAAGGAAGTCCAAATCAAGAAACTTCAAGATACAGAAGGAGCACCAGCAGGAAGCATGGTAGTCCTGATTCAGAAGAATGCCTTGATGGAAACACTGTGGAGCCGAAGGATATATTATCTCAAATTGAAAGTGATTTTTTGAGGGAATTTGAGCATGCTGAAGAACTTGCCAGGACCATTGAGCCTGGAAACACAGAGATGCCAGATGCAATGGAGACAATATTTCAATCTGCCCTTGCTTTTGGAAGACATGGGGGTGTAGAAGAGCTTATGGGTGAAATGGAAAGTGCAGCTGCATTGTATTCAAAAGCTGTTCGCCTGTTAGTTTTCCTTCTAGTGGAAGGGCCATCCTTGATTCTCAATCCGCCATTTTCACTGACAAACTCGGACCGCTATAGGCTTCGAAATTACATCGATATTCTCAATAACAGGCAAGGTTTTTCAAGGTCTCAGCGAATGACACTACTGAAATGTGATGACAGTCATGGTATCCGTAAGGAAAA 1877 0.4225 MNRLVPGKIHLVLEYCKGGDLSMYIQRHGKVPEATAKHFMQQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKSVLKIADFGFARSLQPLGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIMKSTELQFPSDNPSPSSECKDLCQKLLRRNPVCRNRSSYGICSTVSDPLRRTEENYQEDCLPFILDDDSSGPEGSPSFSRKKPSIKSTYGFDLNAKLDKADSASPISNNVNCTSGFGSYTQRSENSTNRLDKHKISRNLTDPLQSPEQIFTNPYQKVTDSLENIDQEYVLVSGPPMDVSSSSVGASRPSHTTYRSGSLPQESSSTINRLSAPMPIVGVPTNSICQIGSSGSQDSAPGTSLGSMDTGDEQPSAHCMTRVKSLQQSASAITELVNEKVESGKHLEAFSIQLVILAIWKQALHICHTQAASAMEGSPNQETSRYRRSTSRKHGSPDSEECLDGNTVEPKDILSQIESDFLREFEHAEELARTIEPGNTEMPDAMETIFQSALAFGRHGGVEELMGEMESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGFSRSQRMTLLKCDDSHGIRKE 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01695 625 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 286 603 IPR045269 GO:0004674|GO:0006914
Cca01g01695 625 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 6 182 IPR045269 GO:0004674|GO:0006914
Cca01g01695 625 MobiDBLite consensus disorder prediction 372 399 - -
Cca01g01695 625 MobiDBLite consensus disorder prediction 372 394 - -
Cca01g01695 625 MobiDBLite consensus disorder prediction 455 492 - -
Cca01g01695 625 ProSiteProfiles Protein kinase domain profile. 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g01695 625 MobiDBLite consensus disorder prediction 469 490 - -
Cca01g01695 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 55 67 IPR008271 GO:0004672|GO:0006468
Cca01g01695 625 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1C-LIKE 286 603 - -
Cca01g01695 625 SUPERFAMILY Protein kinase-like (PK-like) 6 345 IPR011009 -
Cca01g01695 625 MobiDBLite consensus disorder prediction 327 352 - -
Cca01g01695 625 Pfam Protein kinase domain 8 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g01695 625 Gene3D Transferase(Phosphotransferase) domain 1 4 208 - -
Cca01g01695 625 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1C-LIKE 6 182 - -
Cca01g01695 625 SMART serkin_6 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01695 Cca-Chr1 39167414 39178720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01695 8 182 Miscellaneous Gene Families AT3G23000 42.135 2.35e-35 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Cca01g01695 Pkinase 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01695 K08269 - gmx:100791596 1105.51