Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01692 ATGACCAACTCCACTTGCGCCGGCCATGACTCTGACCTCTGCCGAGATGACTCCACCGCGCTCGTCCTCAAATTCGTTGCCATCGCCTCCATCATCCTCGCCGGCATGGCCTCTATCCTTCTCCAAGTTCGAATCCTCTGCTTTGCGCTCCTCTTCCTCGACGTGGTCCTCTCCCCGGCGAACCCTCTCTCCACACGCTCTGACCTCACGTGCCTCCTCCACCTCAACAAGCCCTCCATCGTCTTCGTAGCAGCCTCTGCCGTGGAAAAAGTGCGTGAGCTTGGACTCCGAGTCGTGCTGCTCGACTCGCCCGAGTTTGAGTCACTCACCAGGACACGAACGGACTCACCACGTGTTCGGGTTGATGATCTATTTAAGGGCGATGAATTTGACAGAAACGGTGGTGGTGATGGAGAGAACCTTGAGATGAAGGATGATTTCAGAAATGCACCATATGTTGAGAATCTGATCGAGGAATACATAACTAACTATGATGATGTAGCACAAATTCTGATTAAGGGCCTTTCAAGGAGAAAAATTGGAGCAACAAGCTTAAATTCTAATAGCTCCAGATCACATATCATTTTCACAATTGTCATTGAGTCGTTGTGCAAGGGAACTAAAAAGGGTTTGAGTAGCTCAAAAACTAGCATAATCAGCCTTATTGATCTTGTTGGACCAGACAGGGATGAAGTTGATGATGGAGCCCTTCTCCACTCCGTCGCCAACAACCTCCGTTCTTCAAGAAGACGAGGAGGAGGAGCCAAGAACAATAGGAGGACCGACGAGACAACACTGCCATGGCCCAAGAACAAGCCCAAGCCCAAGATCGGGAACCACAGGTACTCCCAAAAGGAGTTGGAGGGCCTCAGATTTGTCAACATCGCCCAACAGCGCAAGTTCTGGAAGGCTATTCACGCTGCCTTTCAAACCcaaataaatgtgaaagGAAATGAAAAAGGGGTCCAACCATGGATAAATCTCCGGTACGGGAAGCATGTGCATATTCTTCCCGTGGATGATACCATTGAGGGTGTTACTGGGAACCTCTTTGATGCCTACTTAAAACGTGAGTCGGTTACTATTTTTTCAAGGTTTTGTTTGTTGTGTAGGAGAATTGGGATTGGATTGTCTTTGGATAAACTTGAGTAA 1152 0.4818 MTNSTCAGHDSDLCRDDSTALVLKFVAIASIILAGMASILLQVRILCFALLFLDVVLSPANPLSTRSDLTCLLHLNKPSIVFVAASAVEKVRELGLRVVLLDSPEFESLTRTRTDSPRVRVDDLFKGDEFDRNGGGDGENLEMKDDFRNAPYVENLIEEYITNYDDVAQILIKGLSRRKIGATSLNSNSSRSHIIFTIVIESLCKGTKKGLSSSKTSIISLIDLVGPDRDEVDDGALLHSVANNLRSSRRRGGGAKNNRRTDETTLPWPKNKPKPKIGNHRYSQKELEGLRFVNIAQQRKFWKAIHAAFQTQINVKGNEKGVQPWINLRYGKHVHILPVDDTIEGVTGNLFDAYLKRESVTIFSRFCLLCRRIGIGLSLDKLE 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01692 383 MobiDBLite consensus disorder prediction 247 279 - -
Cca01g01692 383 PANTHER KINESIN-RELATED 137 236 IPR027640 GO:0003777|GO:0007018
Cca01g01692 383 Gene3D Kinesin motor domain 118 257 IPR036961 -
Cca01g01692 383 Gene3D - 328 358 - -
Cca01g01692 383 PRINTS Kinesin heavy chain signature 218 236 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g01692 383 PRINTS Kinesin heavy chain signature 183 200 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g01692 383 ProSiteProfiles Kinesin motor domain profile. 1 226 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g01692 383 Pfam Kinesin motor domain 138 231 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g01692 383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 232 IPR027417 -
Cca01g01692 383 PANTHER KINESIN MOTOR DOMAIN PROTEIN 137 236 - -
Cca01g01692 383 MobiDBLite consensus disorder prediction 255 269 - -
Cca01g01692 383 SMART kinesin_4 36 249 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01692 Cca-Chr1 39068616 39073456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01692 141 229 Calmodulin-binding Proteins AT5G65930 35.955 1.54e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01692 K10400 - ccaj:109801995 156.377