Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01685 ATGGTGTCAACACTTCTAATTGTGTGCCTTGTTCTTCCTGTGTTCATGTTCTTCTTCCAATACCTTAAAACCTTGAAGAATCGACACCGTCCACCTGGTCCTAGAGGCTTTCCCATCATAGGGAATCTTCATCAGCTAAATAATTCAGATCTTTATCTTCAGCTATGGAAACTCTCAAAAAAATATGGGCCTCTATTTTCCCTTCAACTAGGTTTAAGGCAAGCAATTGTTGTTTCCTCTCCTGAACTTGCCAAAGTGGTAATGAAAGACCATGACCTCGTGTTTTGTGGGAGACCTAAGTTACTTGGCCAACAGAAATTGTCCTATGATGGGGTTGACATTGCGTTCTCCCCATACAATAGTTATTGGAGAGAAATCAGAAAGATTTGTGTTGTCCATCTCCTTAGCTCCATGCGTGTGTCTAGCTTTTCCTCAGTAAGACACTTTGAGGTTAAGCAATTGATAAAGAAAATATCCATGCATGCCTCTTCTTCGAAGGCTACAAATTTGAGTGAAGCACTCATGTGCCTCACCAGCAGTATTATATGCAGAATAGCCTTTGGGAGAAGGTACGAAGATGAAGGAACAGAAAAAAGTAGGTTCCATGAGTTGTTCAACGAGTGTCAAGCAATGATGGGCATCTTCTTTTTCTCAGATTTTGTTCCTTTCTTAGGTTGGATTGATAAACTCACGGGACTCCATGCTCGTCTTGAGCGGAATTTCAAAGAGTTGGATACGTTCTACCAAGAAGTCATTGATGAACACATGGATCCCAATAGGAAGCCTCCAGAGAACGAGGATTTAATAGATGTCTTACTTCAACTCAAGAAGCAGCGTTCATTTTCTGTAGATCTCGAAAATGATCACATCAAAGCGGTGTTCATGAACATGCTTGTAGCAGCAACAGATACCACTGCTGCCACAACAATCTGGGCTATGACTCTACTACTAAAACATCCAAGAGTGATGAAGAAAGTTCAAGAGGAAATAAGGAATTTGGGAGGTAAAAAAGATTTTCTAGATGAAGATGATACTCAAAAGTTTCCCTATTTCAAGGCGGTGATAAAAGAGACATTGAGACTGCATCTACCAGCACCACTACTTGTGCCAAGAGAAACAAATGAACCATGTACTATAGGTGACTATGAAATTCCAGCCAAGACATTAGTGTACGTGAATGCCTGGGCTATCCATAGAGACTCTAAGGCTTGGAAAGACCCAGAAGAATTTTTACCCGAGAGGTTCTTAAATAATACTACAGATTTTCGTGGGCAAGATTTTGAGTTCATTCCATTTGGTGCTGGTCGTAGAATTTGCCCTGGCATGACTATGGCAATTGCCTCATTAGATCTTATTCTTGCAAATCTTCTTAGGTTGTTTGATTGGGAATTGCCAAAAGGAATGAAAAAAGAAGACATCGATACTGAAGTGTTGCCAGGAATTGCCCAACATAAGAAGAATCCTCTTTGTGTTTTGGCCAAGTTCCGAAGCTAA 1494 0.4056 MVSTLLIVCLVLPVFMFFFQYLKTLKNRHRPPGPRGFPIIGNLHQLNNSDLYLQLWKLSKKYGPLFSLQLGLRQAIVVSSPELAKVVMKDHDLVFCGRPKLLGQQKLSYDGVDIAFSPYNSYWREIRKICVVHLLSSMRVSSFSSVRHFEVKQLIKKISMHASSSKATNLSEALMCLTSSIICRIAFGRRYEDEGTEKSRFHELFNECQAMMGIFFFSDFVPFLGWIDKLTGLHARLERNFKELDTFYQEVIDEHMDPNRKPPENEDLIDVLLQLKKQRSFSVDLENDHIKAVFMNMLVAATDTTAATTIWAMTLLLKHPRVMKKVQEEIRNLGGKKDFLDEDDTQKFPYFKAVIKETLRLHLPAPLLVPRETNEPCTIGDYEIPAKTLVYVNAWAIHRDSKAWKDPEEFLPERFLNNTTDFRGQDFEFIPFGAGRRICPGMTMAIASLDLILANLLRLFDWELPKGMKKEDIDTEVLPGIAQHKKNPLCVLAKFRS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01685 497 Pfam Cytochrome P450 31 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 Gene3D Cytochrome P450 24 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 PANTHER CYTOCHROME P450 71B11-RELATED 4 495 - -
Cca01g01685 497 Coils Coil 323 343 - -
Cca01g01685 497 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 495 - -
Cca01g01685 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Cca01g01685 497 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01685 497 SUPERFAMILY Cytochrome P450 31 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01685 Cca-Chr1 38626837 38630224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01685 5 491 Cytochrome P450 AT4G31500 48.571 2.18e-176 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01685 - - gmx:100801312 779.63