Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01675 ATGTACAGCTGTCCAAAACTGCAAAACAGAATGCACAGAAAATATTGTACAACTAGCTTCCTTCTAGAATACGGGCATCTGTATCCCCTGATAATGGATGACATTGAGGCAAAGATTAAGGCTCTTTGGGTGGAACAAAATGCTGCTTTGGATAGAATTGAATCAGAATGCAGAGAACAGTTAGCAGGGATGAGGAGAGATGCAAAAAGCAAGGAGCAGAAGTTGGCTGAGCAATGGAATGCAAAGCACATGAGGGTAGTGAAATGTATGGAGCAAGTAGGATGCAGAATGCCACAGATTGCTGAGCCTAATGGAAGATAA 321 0.4237 MYSCPKLQNRMHRKYCTTSFLLEYGHLYPLIMDDIEAKIKALWVEQNAALDRIESECREQLAGMRRDAKSKEQKLAEQWNAKHMRVVKCMEQVGCRMPQIAEPNGR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01675 106 PANTHER TRANSCRIPTION FACTOR AS1 32 106 IPR031055 GO:0005634|GO:0006351|GO:0010338
Cca01g01675 106 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 32 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01675 Cca-Chr1 38470612 38470932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01675 32 97 MYB Transcription Factor Family AT2G37630 56.716 1.88e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01675 K09422 - gmx:732551 108.997