Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01634 ATGATTTTCCGTGCATATATATTTGATCAACATGATGACATTTGTGTGCCTATTGTTGTTGTTTCCCCATTTTTCATTTTGCTTTTGCAAGCTAAGATGGGGTGGTTACAGTCCAATTTGCCACTGATGGCTATGTTAATGAATCAGTTCATTTATGCAGGTATTAGTCTCAGCTCAAGACTTGCTTTCTTACATGGAATGAAACCCTCAGTATATGTTGTGTACCGTCATGTTTTTGCAACCATTGTCATTGCCCCCATAGCTTATTTCTCAGGAAGAAATTCTGGCTCCTATCACTTGAATTTAAAGAGTTTTTCCTGGATTTTCTTCATCTCCCTAATTGGCATTACGGTGAATCAAAATTTATTTTTTGAGGGGATATATCTGTCTTCTTCTTCAACAGCAAGTGCAATGGCGAATCTTGTTCCAGCCTTCACATTTGTAATAGCAGCTTGCACAGGATTGGAGAGTGTGAATATTAGAAGCATGAGATCTATAGCGAAGATATTAGGGACAGTGGTGTGTGTAAGTGGAGCACTGTCAATAGCTTTGTTGAAGGGCCAAACGCTTCTAAATGTGGGCATTGGAGGAGACAACTGGTTGATGGGTTGTCTTTCTCTCTTTGGATCATGCACTGCTTGGTCACTTTGGCTCATTTTGCAGGTTCCGGCCTCTAATAGTCACCCTGATCACTTGTCCTTCTCAGCTTGGATGTGTTTCATGGCAACTTTTCAATCCGCAGCGGTGACTCTAGTCGTGGAGCCAGACGTTAATGCATGGAAGATTCACTCTCTACTTGAATTTGGATGCTCTTTATATGCAGGAGTAATGGGATCTGCAGTATTGTTCTTTCTTCAAGCATGGTGCATTTCAAAGAGAGGTCCTCTTTTCTCTGCGATGTTCAATCCTCTTTTCACAGTGATTGCGACCGTTTTGGCTGCCATATTACTTCACGAGAAAATATATGTAGGAAGTTTGCTAGGCGCAATTGGAGTGATCATTGGCTTGTATGTGGTGCTTTGGGGTAAAGCAGAAGAAGTTGCGGTGAAAGAGGAGGAAGATCCAAAATCACAGGTTAATTCTTCCACAGAGGATGTGAACGTTTTGATAGATAATGAATCTCATGAAAAAACATGTAAAAATGATTTGGAACAACCCCTTTTATCTTCTGAATCTCCTTCTCATCGTTGA 1191 0.4072 MIFRAYIFDQHDDICVPIVVVSPFFILLLQAKMGWLQSNLPLMAMLMNQFIYAGISLSSRLAFLHGMKPSVYVVYRHVFATIVIAPIAYFSGRNSGSYHLNLKSFSWIFFISLIGITVNQNLFFEGIYLSSSSTASAMANLVPAFTFVIAACTGLESVNIRSMRSIAKILGTVVCVSGALSIALLKGQTLLNVGIGGDNWLMGCLSLFGSCTAWSLWLILQVPASNSHPDHLSFSAWMCFMATFQSAAVTLVVEPDVNAWKIHSLLEFGCSLYAGVMGSAVLFFLQAWCISKRGPLFSAMFNPLFTVIATVLAAILLHEKIYVGSLLGAIGVIIGLYVVLWGKAEEVAVKEEEDPKSQVNSSTEDVNVLIDNESHEKTCKNDLEQPLLSSESPSHR 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01634 396 Pfam EamA-like transporter family 202 340 IPR000620 GO:0016020|GO:0016021
Cca01g01634 396 Pfam EamA-like transporter family 42 176 IPR000620 GO:0016020|GO:0016021
Cca01g01634 396 PANTHER WAT1-RELATED PROTEIN 43 374 - -
Cca01g01634 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 75 177 - -
Cca01g01634 396 MobiDBLite consensus disorder prediction 375 396 - -
Cca01g01634 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 343 - -
Cca01g01634 396 PANTHER WAT1-RELATED PROTEIN 43 374 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01634 Cca-Chr1 37420922 37425051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01634 33 396 Nodulin-like Gene Family AT4G30420 49.077 9.28e-128 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01634 - - gmx:100812331 525.398