Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca01g01592 | ATGGGAGAGGGGTCTGTGGAACTTGAGGCTATTATAAATGAAGCTGTTGATCTGGAGAACATTCCTCTTGAGGAGGTTTTTGAAAATCTTAAATGCACAAAAGAAGGTTTAAGCTCTGAGCAAGTACAACAGAGGCTAGACTTGTTTGGATACAACAAGCTTGAAGAAAAGAAGGAAAGCAAGATACTAAAGTTTTTGGGCTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCTGCTGCTATCATGGCCATAGCCATGGCACATGGAGGGGGTGAAGGAGGAGATTATCAAGATTTTGCTGGCATAGTTATTTTGCTACTTATAAACTCCACCATCAGTTTCATAGAAGAAAACAATGCTGGCAATGCAGCTGCTGCCCTTATGGCTAGATTAGCCCCCAAAGCAAAGATACTTCGCGATGGAAAATGGAGTGAAGAAGAAGCTTCAGTGTTGGTTCCTGGAGACATAATTAGCATCAAGCTTGGTGACATCATTCCTGCTGATGCACGTCTCCTTGAAGGCGATCCTTTGAAGATTGATCAGTCTGCTCTTACTGGAGAGTCACTTCCTGTCACCAAAAATCCTGAAGATGGAGTATATTCTGGTTCAACTTGCAAGCAAGGAGAAATTGAGGCAGTAGTTATTGCAACCGGAGTTCACACCTTTTTCGGGAAGGCAGCTCATCTTGTGGAAAACACAACACATATTGGACATTTCCAGAAGGTTCTCACATCTACTAGGAACTTCTGCATCTGTTCAATTGCTGTTGGGATGATTATTGAAATCATTGTGATATATGCAATCCACGGAAAGCACTACCGAAATGGTATTGATAACCTCCTTGTGCTATTGATTGGTGGCATCCCTATTGCAATGCCAACTGTTCTTTCTGTTACAATGGCTATTGGTTCACACAAGTTGGCTCAGCAGGGTGCCATAACAAAGAGAATGACTGCCATTGAAGAGATGGCTGGAATGGATGTGTTATGTAGTGACAAAACAGGAACATTAACTCTTAACAAGCTTTCTGTGGACAAGAATATCATTGAGGTTTTTGTTAAAGATGTGGACAGTGATATGGTTGTCCTTATGGCTGCAAGAGCATCAAGGCTAGAGAACCAAGATGCAATTGATTGTGCTATAGTTTCAATGTTGGCAGACCCAAAGGAGGCACGAGCCGGAATACAAGAAGTTCACTTCCTTCCATTCAATCCAACGGATAAAAGAACTGCACTTACATACATTGATGCTTCTGGTAAAATGCACAGGGTTAGCAAAGGTGCACCAGAGCAGATTCTCAATCTTGCATATAACAAATCAGAAATCCAACAGAGGGTTCATGCAATTATTGAGAAGTTTGCAGAACGTGGACTTCGTTCTCTTGCAGTTGCCCGCCAGGAAGTACCTGAGGGAACTAAAGACAGTCCTGGAGGACCATGGGAGTTTGTTGGCCTTCTCCCTCTTTTTGATCCTCCTCGCCATGATAGTGCAGAAACAATTAGAAGAGCTCTAGATCTTGGCGTGAGTGTCAAAATGATCACTGGTGATCAACTTGCAATAGGTAAGGAAACAGGAAGACGTCTAGGGATGGGCACCAACATGTATCCTTCTTCATCACTGCTGGGTGAAAATAAAGATGGATTGGGCGCTGTTGCCGTTGATGATCTCATTGAGAATGTTGATGGTTTTGCTGGAGTCTTTCCTGAGCACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGGGTGAATGATGCACCTGCCCTAAAGATAGCAGACATTGGTATTGCTGTAGCAGATGCTACAGATGCTGCCAGAAGTGCTTCTGACATAGTCCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCAGTTTTAACTAGCCGTGCAATTTTCCAGAGAATGAAAAATTACACTATATATGCTATATCTATCACTATTCGTATTGTGCTTGGTTTCATGTTACTGAACAGCTTTTGGAAATTTGACTTTCCTCCCTTTATGGTTCTTGTCATTGCCATTCTCAATGATGGTACCATCATGACAATATCTAAAGATAGGGTTAAGCCTTCTCCAGTTCCTGATAGTTGGAAGCTTAGTGAAATTTTTACAACTGGGATTGTTCTTGGTAGCTATCTGACTCTAATGACTGTGATCTTCTTCTATATAGCTGTCGAAACAAATTTCTTTCCTAACCATTTTGGTGTGAAACACTTTCACTATGATCCAGAAGCTCCTAACGGTGATCCAACGAATACAATGTTGGGATCTGCTGTCTATCTTCAAGTTAGTACAATTAGTCAAGCCTTAATTTTCGTGACACGATCAAGGGGTTGGTCCTACACAGAAAGACCTGGTCTTTTGCTTGTCACTGCCTTCATCATTGCTCAAGCGATTGCAACTGTTATATCTGCCACTCTCACTTGGAAAGTTGCTGGGATCACACGTATTGGTTGGGGCTGGACAGGAGTGATTTGGCTATACAATATTGTAACTTACCTATTTCTAGATCCTTTAAAGTTTGCAGTTCGCTATGCATTAAGTGGAAGGGCTTGGAATCTGGTGGTAGACCAAAGAACTGCATTCATCAACAAAAATGACTTCGGTAGAGAAGCTCGTGAGGCTGCATGGGCTACTGAGCAGAGAACCTTACATGGCCTCCACTCTGTTGAGTCAAAAGGGATGACAGAGAAGCACCACACCTTCAGAGAAATTAATACATTGGCAGAAGAGGCTAGGAGGCGAGCAGAGATAGCAAGGCTGAGAGAGCTTCACACTCTGAAAGGCAGAGTGGAATCATTTGCCAAGCTAAGGGGTTTGGACATTGATGCCATGAATGGACACTACACTGTCTAA | 2886 | 0.4262 | MGEGSVELEAIINEAVDLENIPLEEVFENLKCTKEGLSSEQVQQRLDLFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIAMAHGGGEGGDYQDFAGIVILLLINSTISFIEENNAGNAAAALMARLAPKAKILRDGKWSEEEASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPEDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHIGHFQKVLTSTRNFCICSIAVGMIIEIIVIYAIHGKHYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNIIEVFVKDVDSDMVVLMAARASRLENQDAIDCAIVSMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDASGKMHRVSKGAPEQILNLAYNKSEIQQRVHAIIEKFAERGLRSLAVARQEVPEGTKDSPGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGENKDGLGAVAVDDLIENVDGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAISITIRIVLGFMLLNSFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPVPDSWKLSEIFTTGIVLGSYLTLMTVIFFYIAVETNFFPNHFGVKHFHYDPEAPNGDPTNTMLGSAVYLQVSTISQALIFVTRSRGWSYTERPGLLLVTAFIIAQAIATVISATLTWKVAGITRIGWGWTGVIWLYNIVTYLFLDPLKFAVRYALSGRAWNLVVDQRTAFINKNDFGREAREAAWATEQRTLHGLHSVESKGMTEKHHTFREINTLAEEARRRAEIARLRELHTLKGRVESFAKLRGLDIDAMNGHYTV | 961 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca01g01592 | 961 | Gene3D | - | 343 | 490 | IPR023299 | GO:0000166 | |
| Cca01g01592 | 961 | SMART | Cation_ATPase_N_a_2 | 17 | 89 | IPR004014 | - | |
| Cca01g01592 | 961 | SFLD | Haloacid Dehalogenase | 313 | 640 | - | - | |
| Cca01g01592 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 181 | 195 | - | - | |
| Cca01g01592 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 331 | 345 | - | - | |
| Cca01g01592 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 485 | 496 | - | - | |
| Cca01g01592 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 507 | 517 | - | - | |
| Cca01g01592 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 589 | 608 | - | - | |
| Cca01g01592 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 612 | 624 | - | - | |
| Cca01g01592 | 961 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 333 | 339 | IPR018303 | - |
Showing 1 to 10 of 32 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca01g01592 | K01535 | - | gmx:100794938 | 1700.26 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca01g01592 | 01 | 35836005 | 35845329 | Cca01g01592 | 01 | 35836005 | 35845329 | ECH |
Showing 1 to 1 of 1 entries