Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g01592 | ATGGGAGAGGGGTCTGTGGAACTTGAGGCTATTATAAATGAAGCTGTTGATCTGGAGAACATTCCTCTTGAGGAGGTTTTTGAAAATCTTAAATGCACAAAAGAAGGTTTAAGCTCTGAGCAAGTACAACAGAGGCTAGACTTGTTTGGATACAACAAGCTTGAAGAAAAGAAGGAAAGCAAGATACTAAAGTTTTTGGGCTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCTGCTGCTATCATGGCCATAGCCATGGCACATGGAGGGGGTGAAGGAGGAGATTATCAAGATTTTGCTGGCATAGTTATTTTGCTACTTATAAACTCCACCATCAGTTTCATAGAAGAAAACAATGCTGGCAATGCAGCTGCTGCCCTTATGGCTAGATTAGCCCCCAAAGCAAAGATACTTCGCGATGGAAAATGGAGTGAAGAAGAAGCTTCAGTGTTGGTTCCTGGAGACATAATTAGCATCAAGCTTGGTGACATCATTCCTGCTGATGCACGTCTCCTTGAAGGCGATCCTTTGAAGATTGATCAGTCTGCTCTTACTGGAGAGTCACTTCCTGTCACCAAAAATCCTGAAGATGGAGTATATTCTGGTTCAACTTGCAAGCAAGGAGAAATTGAGGCAGTAGTTATTGCAACCGGAGTTCACACCTTTTTCGGGAAGGCAGCTCATCTTGTGGAAAACACAACACATATTGGACATTTCCAGAAGGTTCTCACATCTACTAGGAACTTCTGCATCTGTTCAATTGCTGTTGGGATGATTATTGAAATCATTGTGATATATGCAATCCACGGAAAGCACTACCGAAATGGTATTGATAACCTCCTTGTGCTATTGATTGGTGGCATCCCTATTGCAATGCCAACTGTTCTTTCTGTTACAATGGCTATTGGTTCACACAAGTTGGCTCAGCAGGGTGCCATAACAAAGAGAATGACTGCCATTGAAGAGATGGCTGGAATGGATGTGTTATGTAGTGACAAAACAGGAACATTAACTCTTAACAAGCTTTCTGTGGACAAGAATATCATTGAGGTTTTTGTTAAAGATGTGGACAGTGATATGGTTGTCCTTATGGCTGCAAGAGCATCAAGGCTAGAGAACCAAGATGCAATTGATTGTGCTATAGTTTCAATGTTGGCAGACCCAAAGGAGGCACGAGCCGGAATACAAGAAGTTCACTTCCTTCCATTCAATCCAACGGATAAAAGAACTGCACTTACATACATTGATGCTTCTGGTAAAATGCACAGGGTTAGCAAAGGTGCACCAGAGCAGATTCTCAATCTTGCATATAACAAATCAGAAATCCAACAGAGGGTTCATGCAATTATTGAGAAGTTTGCAGAACGTGGACTTCGTTCTCTTGCAGTTGCCCGCCAGGAAGTACCTGAGGGAACTAAAGACAGTCCTGGAGGACCATGGGAGTTTGTTGGCCTTCTCCCTCTTTTTGATCCTCCTCGCCATGATAGTGCAGAAACAATTAGAAGAGCTCTAGATCTTGGCGTGAGTGTCAAAATGATCACTGGTGATCAACTTGCAATAGGTAAGGAAACAGGAAGACGTCTAGGGATGGGCACCAACATGTATCCTTCTTCATCACTGCTGGGTGAAAATAAAGATGGATTGGGCGCTGTTGCCGTTGATGATCTCATTGAGAATGTTGATGGTTTTGCTGGAGTCTTTCCTGAGCACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGGGTGAATGATGCACCTGCCCTAAAGATAGCAGACATTGGTATTGCTGTAGCAGATGCTACAGATGCTGCCAGAAGTGCTTCTGACATAGTCCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCAGTTTTAACTAGCCGTGCAATTTTCCAGAGAATGAAAAATTACACTATATATGCTATATCTATCACTATTCGTATTGTGCTTGGTTTCATGTTACTGAACAGCTTTTGGAAATTTGACTTTCCTCCCTTTATGGTTCTTGTCATTGCCATTCTCAATGATGGTACCATCATGACAATATCTAAAGATAGGGTTAAGCCTTCTCCAGTTCCTGATAGTTGGAAGCTTAGTGAAATTTTTACAACTGGGATTGTTCTTGGTAGCTATCTGACTCTAATGACTGTGATCTTCTTCTATATAGCTGTCGAAACAAATTTCTTTCCTAACCATTTTGGTGTGAAACACTTTCACTATGATCCAGAAGCTCCTAACGGTGATCCAACGAATACAATGTTGGGATCTGCTGTCTATCTTCAAGTTAGTACAATTAGTCAAGCCTTAATTTTCGTGACACGATCAAGGGGTTGGTCCTACACAGAAAGACCTGGTCTTTTGCTTGTCACTGCCTTCATCATTGCTCAAGCGATTGCAACTGTTATATCTGCCACTCTCACTTGGAAAGTTGCTGGGATCACACGTATTGGTTGGGGCTGGACAGGAGTGATTTGGCTATACAATATTGTAACTTACCTATTTCTAGATCCTTTAAAGTTTGCAGTTCGCTATGCATTAAGTGGAAGGGCTTGGAATCTGGTGGTAGACCAAAGAACTGCATTCATCAACAAAAATGACTTCGGTAGAGAAGCTCGTGAGGCTGCATGGGCTACTGAGCAGAGAACCTTACATGGCCTCCACTCTGTTGAGTCAAAAGGGATGACAGAGAAGCACCACACCTTCAGAGAAATTAATACATTGGCAGAAGAGGCTAGGAGGCGAGCAGAGATAGCAAGGCTGAGAGAGCTTCACACTCTGAAAGGCAGAGTGGAATCATTTGCCAAGCTAAGGGGTTTGGACATTGATGCCATGAATGGACACTACACTGTCTAA | 2886 | 0.4262 | MGEGSVELEAIINEAVDLENIPLEEVFENLKCTKEGLSSEQVQQRLDLFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIAMAHGGGEGGDYQDFAGIVILLLINSTISFIEENNAGNAAAALMARLAPKAKILRDGKWSEEEASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPEDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHIGHFQKVLTSTRNFCICSIAVGMIIEIIVIYAIHGKHYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNIIEVFVKDVDSDMVVLMAARASRLENQDAIDCAIVSMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDASGKMHRVSKGAPEQILNLAYNKSEIQQRVHAIIEKFAERGLRSLAVARQEVPEGTKDSPGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGENKDGLGAVAVDDLIENVDGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAISITIRIVLGFMLLNSFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPVPDSWKLSEIFTTGIVLGSYLTLMTVIFFYIAVETNFFPNHFGVKHFHYDPEAPNGDPTNTMLGSAVYLQVSTISQALIFVTRSRGWSYTERPGLLLVTAFIIAQAIATVISATLTWKVAGITRIGWGWTGVIWLYNIVTYLFLDPLKFAVRYALSGRAWNLVVDQRTAFINKNDFGREAREAAWATEQRTLHGLHSVESKGMTEKHHTFREINTLAEEARRRAEIARLRELHTLKGRVESFAKLRGLDIDAMNGHYTV | 961 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g01592 | 961 | Gene3D | - | 343 | 490 | IPR023299 | GO:0000166 | |
Cca01g01592 | 961 | SMART | Cation_ATPase_N_a_2 | 17 | 89 | IPR004014 | - | |
Cca01g01592 | 961 | SFLD | Haloacid Dehalogenase | 313 | 640 | - | - | |
Cca01g01592 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 181 | 195 | - | - | |
Cca01g01592 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 331 | 345 | - | - | |
Cca01g01592 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 485 | 496 | - | - | |
Cca01g01592 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 507 | 517 | - | - | |
Cca01g01592 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 589 | 608 | - | - | |
Cca01g01592 | 961 | PRINTS | P-type cation-transporting ATPase superfamily signature | 612 | 624 | - | - | |
Cca01g01592 | 961 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 333 | 339 | IPR018303 | - | |
Cca01g01592 | 961 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 17 | 857 | IPR023298 | - | |
Cca01g01592 | 961 | Gene3D | - | 910 | 961 | - | - | |
Cca01g01592 | 961 | TIGRFAM | ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase | 36 | 815 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Cca01g01592 | 961 | PANTHER | PLASMA MEMBRANE ATPASE | 4 | 941 | - | - | |
Cca01g01592 | 961 | Gene3D | - | 134 | 218 | - | - | |
Cca01g01592 | 961 | SUPERFAMILY | Calcium ATPase, transduction domain A | 134 | 231 | IPR008250 | - | |
Cca01g01592 | 961 | CDD | P-type_ATPase_H | 36 | 851 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Cca01g01592 | 961 | PRINTS | H+-transporting ATPase (proton pump) signature | 447 | 465 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cca01g01592 | 961 | PRINTS | H+-transporting ATPase (proton pump) signature | 561 | 577 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cca01g01592 | 961 | PRINTS | H+-transporting ATPase (proton pump) signature | 589 | 605 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cca01g01592 | 961 | PRINTS | H+-transporting ATPase (proton pump) signature | 620 | 645 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cca01g01592 | 961 | PRINTS | H+-transporting ATPase (proton pump) signature | 770 | 791 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cca01g01592 | 961 | Gene3D | - | 96 | 824 | - | - | |
Cca01g01592 | 961 | Pfam | E1-E2 ATPase | 132 | 311 | - | - | |
Cca01g01592 | 961 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 563 | 666 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cca01g01592 | 961 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 103 | 538 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cca01g01592 | 961 | SUPERFAMILY | HAD-like | 327 | 636 | IPR036412 | - | |
Cca01g01592 | 961 | Pfam | Cation transporter/ATPase, N-terminus | 20 | 83 | IPR004014 | - | |
Cca01g01592 | 961 | Gene3D | - | 328 | 626 | IPR023214 | - | |
Cca01g01592 | 961 | SFLD | p-type atpase | 313 | 640 | IPR044492 | - | |
Cca01g01592 | 961 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 4 | 941 | - | - | |
Cca01g01592 | 961 | Pfam | haloacid dehalogenase-like hydrolase | 327 | 603 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g01592 | Cca-Chr1 | 35836005 | 35845329 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g01592 | 1 | 961 | Primary Pumps ATPases | AT5G62670 | 78.170 | 0.0 | 1507 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g01592 | K01535 | - | gmx:100794938 | 1700.26 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca01g01592 | 01 | 35836005 | 35845329 | Cca01g01592 | 01 | 35836005 | 35845329 | ECH |