Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01582 ATGGAGAGGGTTGTGGAGCCGAAGGTGCTTCCTCGGACCTTGCCTATCCTGGTTGAGGTATCGAATGCACACACAGCTGCTGCAAGAGAGTCAAGTCAGAGACTAAATCGCCGGGAGGGATCGAGTGTTGGTGGAATTTCGGTGAGGGAAGTGAGTCAATTGTCCAAAACAAGGGATGTTGAGGTGCCAATTACTCGATTGGCCTCTCTCAGGGAAGTGGCTCAGTTAACGAATGCACGGATATACTTGGTTCAAGAAGATATGGGATTCGATACTCGATCCTCTGAAGAATCCCTCACCTTTGAGCCTACCATAGCATGGAAAGGAAAGGCCCCTTCACCAGAAGCAGAAGAATTTGTGCCTGATGTTGAGACATTGAAGGGAAGCAGCGATTCATTTGAGGACAGCGATCCAAGTTTATTTGCTGGTGCTAGTCATCCCCCAGAACCTGTTGATACAGATCTTATGAGAACTGTTTATGTGCCTATAGGTCAAAACAAATCTGAGGCTGGATGTTTAATCAGGAACTTGCCTACAAAAGGCCCTCTTTTGGAAGATCTCTCGATTCGTGTTCCTGCAAAGAAACCAAGTCCAGCTGCCCTTTCCCCTGAAGAAAGTCTGGTTGAAGAACTAAATGATATAGGGAACATAGCATTTTTGGGTCCTCGGGCATCGCAGAATATCGAGAACTCTCTCCTCCCTCCAGATGCTGAGGAAAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCTAGTGGCAATGTGAGTCCTCTTAGTAGTATTGATAGTACTGGTGTTGTCACTGCTATGAGCATTGTTAATAGTTGTGCTAGTACATATCGGAGTGATGCAATGACTAGTGATGGCATGCTTAGTTTAGACAGGAACTGTGATAGTACTAAAGGGAGTGTAAGGGGGGATTCACTAGAGAGTGCTAAAACTAGTGCTAGTAGAGCAAGTGATAGCAGCGGCCTCAGCGATGACAGCAATTGGAGCAACATTACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCTATCCGATTACGAGATGGGATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGACTAGGATGTGGTGACATTGGAAGTGTATATCTCTCGGAGCTGAGTGGAACTCGGTGTTATTTTGCAATGAAAGTTATGGATAAGGCATCCCTAGCAAGCAGAAAGAAGCTGACTAGAGCACAGACAGAGAGGGAGATATTGCAGTTGCTGGACCATCCATTTCTACCAACTTTGTATACGCATTTTGAGACTGATCGATTCACGTGTTTGGTAATGGAATATTGTCCAGGGGGTGATCTTCACACTTTAAGGCAGCGGCAGCCTGGGAAGCATTTCTCAGAATATGCTGCACGGTTTTATGCCGCGGAGGTCCTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTAGTGTATAGAGACCTTAAACCAGAAAATGTGTTGGTCCGAGACGATGGTCACATAATGCTATCAGATTTTGATCTTTCCCTCAGATGTGCTGTTTCACCTACTCTTATCAGAACTTCCTATGATGGTGACCCGTCAAAACGGGCCGGTGGTGCATTCTGTGTTCAACCTGCATGTATTGAGCCATCATCAGTGTGCATCCAACCTGCATGTTTCATCCCTCGGTTATTTCCTCAGAAAAACAAGAAGTCTCGGAAGCCAAGAGCTGATCCTGGGTTGCCTTCCAGCACACTTCCAGAGCTTGTTGCCGAGCCTACACAAGCTCGATCTATGTCCTTCGTTGGCACTCATGAGTATCTTGCCCCAGAAATTATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGCTGTTATATGGGAAAACCCCTTTCAAAGGGTCAGGAAACCGTGCCACACTTTTCAATGTAGTAGGTCAGCAGCTCAGGTTTCCCGAGTCACCTGCTACCAGTTATGCAAGCAGGGATCTGATCCGTGGCTTGCTAGTGAAGGAGCCGCAGCATCGGCTTGGTGTTAAAAGGGGTGCAACTGAGATCAAGCAGCACCCCTTCTTCGAAGGTGTGAACTGGGCGTTGATTAGGTGCAGCACACCGCCAGAAGTGCCGAGACCGGTGGAAAATGAACTACCAGGGAAGGCTGGACCAGTTGATCCTGTTGGAGTTGGCACTGGCAGCACTAGTAAGAGGGTAGTAGGTACTGACATGAAGTCTTGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 2286 0.4676 MERVVEPKVLPRTLPILVEVSNAHTAAARESSQRLNRREGSSVGGISVREVSQLSKTRDVEVPITRLASLREVAQLTNARIYLVQEDMGFDTRSSEESLTFEPTIAWKGKAPSPEAEEFVPDVETLKGSSDSFEDSDPSLFAGASHPPEPVDTDLMRTVYVPIGQNKSEAGCLIRNLPTKGPLLEDLSIRVPAKKPSPAALSPEESLVEELNDIGNIAFLGPRASQNIENSLLPPDAEEKECVWDASLPPSGNVSPLSSIDSTGVVTAMSIVNSCASTYRSDAMTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFTCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSYDGDPSKRAGGAFCVQPACIEPSSVCIQPACFIPRLFPQKNKKSRKPRADPGLPSSTLPELVAEPTQARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVENELPGKAGPVDPVGVGTGSTSKRVVGTDMKSWGKYLDFEFF 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01582 761 MobiDBLite consensus disorder prediction 290 343 - -
Cca01g01582 761 ProSiteProfiles Protein kinase domain profile. 366 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g01582 761 Pfam Protein kinase domain 596 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g01582 761 Pfam Protein kinase domain 367 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g01582 761 Gene3D Transferase(Phosphotransferase) domain 1 450 717 - -
Cca01g01582 761 Gene3D Phosphorylase Kinase; domain 1 366 449 - -
Cca01g01582 761 SUPERFAMILY Protein kinase-like (PK-like) 347 720 IPR011009 -
Cca01g01582 761 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 78 761 - -
Cca01g01582 761 MobiDBLite consensus disorder prediction 291 339 - -
Cca01g01582 761 SMART serkin_6 366 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g01582 761 PANTHER FLIPPASE KINASE 1-RELATED 78 761 - -
Cca01g01582 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Cca01g01582 761 CDD STKc_phototropin_like 364 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01582 Cca-Chr1 35532958 35537648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01582 1 761 AGC Kinase Gene Family AT2G44830 65.944 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Cca01g01582 Pkinase 6.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01582 - - gmx:100792314 1383.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01582 01 35532958 35537648 Cca01g01582 01 35532958 35537648 ECH
Cca01g01582 01 35532958 35537648 Cca07g02083 07 48589094 48594885 PCT