Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01569 ATGACCAACTCCACCTGCGCCAGCCATGACTCTGACCTCTGCCGAGACGACTTCGCCGCGCTCATCCTCAAATTCGTCGCCATCACCTCCATCCTCCTCGCTGGCATGGCATGCATCCTTCTCCAAGTTCCAATCCTCTACTTCATGCTCTTCTCCTTTGGCGTGGTCCTCTCTCCGGCGAACCCTCTCTCCACGCACTCTGACCTCACGCGCCTCCTCCACCTCAACAAGTCCTCCATCGTCTTCCCAGCTGCCTCCGTCGCGGAGAAAGCGCGCGAGCTTGGACTCCGAGTCTACTTCACTTTTATTTCAAACATCTCCCAATTTTCAAGTGGGGCTCTGAAGCCAACTGATGTCAAGATGTTGTTGGTTCATGTAACATGGGCTTGGTTTCAGCCTGAAATTCTCTTCCAAAATCACGAGGCAATGGAACCGACCTCTGGAATCCTTAAGATTCCTCTGAATTCCTTCAAGAAGGATCAAGATTTTTCATTACAATGGGTCATTGTACTTCAAGAAAATGTTCGACAAATTGTACCAGCTGATTGGAAACCAGAGTCACCAGATAAGTTTGGTGATATTCCCGAATTAATCAAGTCTCTAAATTTGGTACAACTTGAAGATAAAAAACCACCAGGTCAAGGACCAAAATCAACTCAGACTTCTACAAAAGTCTCGTCTGCCAACCCCCCTACACAAAAACCTGCTGCATATCGTCCACCACATGCTAAGAATGCAGCTTCTATTCAGGCAGAGCTAGTGTTTGGCCTGAGCGTGAGTGATCGGCCGAGAATTACTCGGGTTAAGTGCGCGTTGGGCACGGTACTCGGCCTAGGTGTATCCTTAGCCGAGGAAATTACTCGGGAGGGAGACTTGAAGGGCTGGAGTACGCGTTGCAGTTATCGGCTGAGAATTACTCGGGTTAAGTGCGCATTAGGCATGGTACTCGGCCTAGGTGCATCCTTAGCCGAGGAGGTTGCTCGGGAGGGAAACCTGAAGGGCTCGAGTACGCGTCGGAGTGTTCGGCTGAGAATTGCTCAGGTTAAGTGCGCGTTAGGCATGGTACTCGGCCTAGGTGCATCCTTAGCCGAGGAGGTTGCTCGGGAGGGAAACCTGAAGGGCTCGAGTACGCGTCGGAGTGTTCGGCTGAGAATTGCTCGGGTTAAGTGCGTGTTAGGCAGGATACTCGGCCTAGGTGCATCCTTAGCCGAGGAAATTACTCGGGAGGGAGACCTGAAGGGCTGGAGTACGCGTTGGAGTAATCGGCTGAGAATTGCTCGCGTTAAGTGCACGTTAGGAAGGGTACTCGGCCTAGGTGCATCCTTAGCCGAGGAGGTTACTCGGGAGGGAAACCTGAAGGGCTCGAGTACGTGTCGTTCTAGTGGTCGGCCGAGAGTTACTCGGCGTCGGCAGAAGTCATCGTGCTCGGCCTAG 1434 0.523 MTNSTCASHDSDLCRDDFAALILKFVAITSILLAGMACILLQVPILYFMLFSFGVVLSPANPLSTHSDLTRLLHLNKSSIVFPAASVAEKARELGLRVYFTFISNISQFSSGALKPTDVKMLLVHVTWAWFQPEILFQNHEAMEPTSGILKIPLNSFKKDQDFSLQWVIVLQENVRQIVPADWKPESPDKFGDIPELIKSLNLVQLEDKKPPGQGPKSTQTSTKVSSANPPTQKPAAYRPPHAKNAASIQAELVFGLSVSDRPRITRVKCALGTVLGLGVSLAEEITREGDLKGWSTRCSYRLRITRVKCALGMVLGLGASLAEEVAREGNLKGSSTRRSVRLRIAQVKCALGMVLGLGASLAEEVAREGNLKGSSTRRSVRLRIARVKCVLGRILGLGASLAEEITREGDLKGWSTRWSNRLRIARVKCTLGRVLGLGASLAEEVTREGNLKGSSTCRSSGRPRVTRRRQKSSCSA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01569 477 MobiDBLite consensus disorder prediction 214 233 - -
Cca01g01569 477 MobiDBLite consensus disorder prediction 452 477 - -
Cca01g01569 477 MobiDBLite consensus disorder prediction 207 242 - -
Cca01g01569 477 PANTHER PHD FINGER PROTEINS 110 159 - -
Cca01g01569 477 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATX3 110 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01569 Cca-Chr1 34990348 34994690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01569 2 46 Inorganic Solute Cotransporters AT1G60960 55.556 3.29e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01569 K15026 - gmx:100810278 134.42