Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g01544 | ATGGTTGAGAGGGGTGCAAATGGTGGAAGAAGCATGTCCATGGATGAATTGGAGAAGCTTTCATGTTATGATTATGTTGCCAAAGGCAACATAAGCAGCCTTGTTGATTGCGCAATTTGCTTTGAGAGCCTCAACACAAGAGATAAGTGCATATTGTTACTTATGTGCAAGCATAGTTTTCTTGCTCAATGTGTTGACTCATGGCTTCTAATGCTTTGTTTGAGAGAGAGGGAGAAATCAAAGAGAATATGTGAGAAGTGA | 261 | 0.4023 | MVERGANGGRSMSMDELEKLSCYDYVAKGNISSLVDCAICFESLNTRDKCILLLMCKHSFLAQCVDSWLLMLCLREREKSKRICEK | 86 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g01544 | 86 | ProSiteProfiles | Zinc finger RING-type profile. | 37 | 77 | IPR001841 | - | |
Cca01g01544 | 86 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE | 7 | 71 | - | - | |
Cca01g01544 | 86 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 7 | 71 | - | - | |
Cca01g01544 | 86 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 86 | IPR013083 | - | |
Cca01g01544 | 86 | SUPERFAMILY | RING/U-box | 17 | 71 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g01544 | 1 | 83 | C3H Transcription Factor Family | AT2G42360 | 32.955 | 1.51e-06 | 42.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g01544 | - | K15692 | gmx:102667575 | 113.62 |