Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01520 ATGTCTCCTTGGCTTATACCCTTTGCTACTATAGTAGTGGCGATCCTTATTTACCACCTTTTGAAGCTGAAAAATGGGCCTTCATTACCTCTGCCACCAGGTCCGAGGCCATGGCCCATTGTGGGAAACTTACCTCACATGGGCCCAGCACCACACCGGAGTCTGACAGCCTTGGCCCAGACTTATGGGCCACTGCTGTATCTCCGGATGGGCAGTACTCCCATGGTGGTAGCGGCCTCTGCCTCGGTGGCAGAGCAGTTTCTGAAGGTCCACGACTTGAATTTCTGCAACCGGCCACTAAACTTCAGGACCACATACTTGACCTATAACAAACAAGACCTTGCTTTTGCACCCTACGGCCCACGGTGGCGGTTGCGGCGGAAAATAAGTAACCTTCACATGCTTTCCGCTAAGGCTGTGGATGACTTCAGTCAACTTCGACAGGAAGAGGTGAAGAGATTGGTACATAATTTAGCAATAACGTCAAAATCTAAAGCAGTAAAGTTAGGTGAACTATTGAATATATGTACCACCAACACATTAACAAGGGTAATGATAGGACGACGACTTCTCAAGGATGATAATAGTTATGATCCAAGGGCAAATGAGTTTAGATCTATTGTGATAGATCTTCTGATATTGCTTGGAGTTTTCAATATTGGTGACTTTGTTCCTATATTAGATTGGTTGGACCTTCAAGGAGTAAGAGCCACGACAAAAAATTTACATAAGAGGCTTGATTCATTTTTAACTACCATTCTCAAGGAACACAAAGTTTTCAAGAATGAGCAACACCAAAACCTTTTGAGTGTATTGCTATTAGACAAAGAGACTCATCAAGAAGGAGAAGAACTCCTTGAACAAGAGATCAAAGCAATATTTGCGGACATATTAATTGCTGGGACAGACACATCATCAAGCACAATAGAGTGGGCAATTGCAGAACTAATTAAGAATCCACAAATCATGCATAGGGTCCAACAAGAGTTGAATATTGTTGTGGGTCAAGACAGGCTTGTGACTGAACTAGACTTACCCAACCTTCCCTATTTACAAGCTATTGTGAAGGAAACATTCCGTGCAACTCTTTTGGTTAATGTTTGGGCCATAGGACGTGACCCCAAGGAATGGCTTGACCCATTAGTTTTCAAGCCTGAAAGGTTTCTTCCTGGTAGTGAAAAGGCCAATGTTGATGTTAAAGGCAATAACTTTGAGGTTATACCTTTTGGTGCTGGACGTAGAATATGTTCTGGTGTGACTTTAGGTCTAAAGGTGGTTCAGTTGCTCATTGCAACCCTAGCCCATGCATTTGATTGGGAGTTAGAGAATGGGCTTGACCCCAAAAATCTCAACATGGATGAAGCATATGGGCTCACCCTCCAAAGAGTAGTTCCCTTATCTGCCCACCCTCGCCCGAGGCTCGCAAAACATGTGTATtcatcattatcatcatcatga 1458 0.4321 MSPWLIPFATIVVAILIYHLLKLKNGPSLPLPPGPRPWPIVGNLPHMGPAPHRSLTALAQTYGPLLYLRMGSTPMVVAASASVAEQFLKVHDLNFCNRPLNFRTTYLTYNKQDLAFAPYGPRWRLRRKISNLHMLSAKAVDDFSQLRQEEVKRLVHNLAITSKSKAVKLGELLNICTTNTLTRVMIGRRLLKDDNSYDPRANEFRSIVIDLLILLGVFNIGDFVPILDWLDLQGVRATTKNLHKRLDSFLTTILKEHKVFKNEQHQNLLSVLLLDKETHQEGEELLEQEIKAIFADILIAGTDTSSSTIEWAIAELIKNPQIMHRVQQELNIVVGQDRLVTELDLPNLPYLQAIVKETFRATLLVNVWAIGRDPKEWLDPLVFKPERFLPGSEKANVDVKGNNFEVIPFGAGRRICSGVTLGLKVVQLLIATLAHAFDWELENGLDPKNLNMDEAYGLTLQRVVPLSAHPRPRLAKHVYSSLSSS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01520 485 Gene3D Cytochrome P450 18 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01520 485 SUPERFAMILY Cytochrome P450 32 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01520 485 PRINTS E-class P450 group I signature 366 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01520 485 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01520 485 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01520 485 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01520 485 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01520 485 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01520 485 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01520 485 Pfam Cytochrome P450 32 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01520 485 Pfam Cytochrome P450 363 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01520 485 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 361 471 - -
Cca01g01520 485 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01520 485 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01520 485 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01520 485 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 360 - -
Cca01g01520 485 PANTHER FLAVONOID 3'-MONOOXYGENASE 8 360 - -
Cca01g01520 485 PANTHER FLAVONOID 3'-MONOOXYGENASE 361 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01520 Cca-Chr1 32922902 32927796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01520 8 480 Cytochrome P450 AT5G07990 54.134 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01520 K05280 - gmx:100777999 697.582