Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01519 atGTCTCCTTGGCTTATAGCCTTTGCTACTATAGTAGCAGCGATCCTTATTAACCGGCTTTTGAAGCTCCTAAGTGGACCTTCATTACCTCTGCCACCAGGCCCCAGGCCATGGCCCATCGTGGGAAACCTACCCCACATGGGCCCGGCACCGCACCAGGGCCTGGCAGCTTTAGCCCAAACTTATGGGCCGCTGATGCACCTCCAGCTGGGTATCGCGCATGTGGTGGTGGCAGCGTCTGGCACGGTGGCAGAGCAGTTTTTGAAGGTTCATGACGCGAATTTCTGCAGCCGGCCATTAAACTTCAGGACCAAGTACATGACCTATGACGTAAAAGACCTCATATTTGCACCCTACGGCCCACGGTGGCGGTTTCTGAGGAAAATAAGCACCGTTCACATGTTCTCCGGTAAGGCCTTGGATGATTTTTGTCAACTGCGACAGGAAGAGGTGAAGAGATTGATACATAATTTAGCAATATCAAAATCCAAAGCAGTGAACTTAGGGCGACTATTGAACATATGTACCACCAACACAATGTCAAAGATAATGATAGGGCGACGACTTTTCAATGATTATGGTAGTTATGATACAAAGGCAGATGAGTTTAGATCTATAGTGGGGGATCTTATGGCATTGCTTGGAGTTTTCAATATCGGTGACTTTGTTCCTATCTTAGACTGGTTGGATCTTCAAGGAGTAAAACCCAAGACAAAGAATTTACATAAGAGGCTTGATGCATTTTTAACTACCATTCTTGAAGAACACATAATTTCCAAGAATGAGCAAGACAAAAACTTTTTGAGTGCATTGCTATCACATAAAGAGACTCATCAAGAAGGAGATGAAGTCCTTGAACACGAGATCAAAGCAATATTTGCGGACATATTAATTGCTGGGACAGATACATCATCAAGCACAATAGAATGGGCAATAGCAGAACTAATTAAGAATCCAAAAATCATGGTTAAGGTCCAACAAGAGTTGAATATTGTTGTGGGTCAAGATAGGCTTGTGACTGAACTAGACTTACCCCACCTTCCCTACTTGCAAGCTGTGGTGAAGGAAACATTACGTCTCCACCCACCGACCCCTCTTTCCCACGAGTTGCTGAAGAAGCTTGTGAAATATTTGGTTACCACATACCTAAAGGTGCAACTCTTTTGGTTAATATTTGGGCCATAG 1185 0.4439 MSPWLIAFATIVAAILINRLLKLLSGPSLPLPPGPRPWPIVGNLPHMGPAPHQGLAALAQTYGPLMHLQLGIAHVVVAASGTVAEQFLKVHDANFCSRPLNFRTKYMTYDVKDLIFAPYGPRWRFLRKISTVHMFSGKALDDFCQLRQEEVKRLIHNLAISKSKAVNLGRLLNICTTNTMSKIMIGRRLFNDYGSYDTKADEFRSIVGDLMALLGVFNIGDFVPILDWLDLQGVKPKTKNLHKRLDAFLTTILEEHIISKNEQDKNFLSALLSHKETHQEGDEVLEHEIKAIFADILIAGTDTSSSTIEWAIAELIKNPKIMVKVQQELNIVVGQDRLVTELDLPHLPYLQAVVKETLRLHPPTPLSHELLKKLVKYLVTTYLKVQLFWLIFGP 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01519 394 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 367 - -
Cca01g01519 394 SUPERFAMILY Cytochrome P450 32 366 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01519 394 Pfam Cytochrome P450 32 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01519 394 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01519 394 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01519 394 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01519 394 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01519 394 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01519 394 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01519 394 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01519 394 Gene3D Cytochrome P450 27 380 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01519 394 PANTHER FLAVONOID 3'-MONOOXYGENASE 6 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01519 Cca-Chr1 32885607 32892711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01519 8 367 Cytochrome P450 AT5G07990 58.152 1.44e-147 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01519 K05280 - gmx:100777999 537.339