Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01515 ATGGTGGTGATGGAGATGAACACAGTGCACGTTGTGTTTGGAACAGTTTTGGTGGTGTTGATGCATGTCTTCAACAGCTTGGTGTTGAGGCCAAGATCACTGAGAGCAAAGCTTCAGAGGCAGGGGATTCAAGGGCCTCCACCTCACTTCTACCTTGGCAACATCCCACAAATTAAGACCCTTTTGCTTCAAGTTCAGTCAGCACCAACCACACAAGTCAAAGACAAAGAGCAAGATGTTTCTCCTTCACATGCATGGCCTTTAACTGTCTTCCCTCATGTTCAAAAGTGGATCAAACAATATGGTTCCATGTACTTGTTTTCTTCTGGGAATGACCAGTGGCTAATGGTAGCAGATATAGAGATGGTGAAGGAAATTATCATGTACACTTCTTTGAATCTAGGAAAGCCTACTTATCTGTCCAAAGATCTGGGGCCACTTTTGGGCCAAGGTATATTGGCATCAAGTGGCCAAATTTGGGCTCATCAGAGGAAGATAATTGCCCCTGAACTGTACCTTGATAAGGTGAAGGCAATGGTTAATCTGATAGTCGAGTCAACAAATGTGACACTAAGGTCTTGGGAGGCTAGACTTGAAAGCGAGGGAGATATTTCAGAGATTAAAGTTGATGAAGATCTGCGAAGTTTGTCAGCTGACATAATTGCCAGAGCTTGTTTTGGGAGCAATTACATTGAAGGAAAAGAAATATTCTCAAAGCTTAGAGATGTTCAAAAGCTCTTGTCCAAAGTACATGCTGGAATTCCAGGCTCTCGATACTTGCCTAACAAAAGCAACAGACAGCTATGGAGATTGGAGAAAGAGATTAACTCAAAGATATTGAAGCTCATAAAACAACGCCAGGAGGAAACTCATGAGCAGGATCTCTTACAAATGATACTTGAGGGTGCAAAGAATTGCGAGGGTAGTGATGGCTTCTTTTCAAATTCCATCTCTCGCGACAGGTTTATGATAGATAATTGCAAAAACATATTCTTTGCTGGATATGAGACTACTGCAATCACAGCATCATGGTGCTTGATGCTGTTAGCTACACACCAAGATTGGCAAGATCGTGCCCGTGCTGAGGTGCTTCAAGTTTGTGGAAAAAGTGCTCCAGATGCAACTATGCTTAAAAGCCTCAAAACGTTAACCATGGTGATACAAGAGACTTTGAGGCTTTATTCACCACAAGCACATGTTGTTAGAACAGCTTTCCAAGATATTAATCTGAAAGGCATGCTGATTCCCAAAGGAATGAATATTCAGATTCCAATCCCACTTCTGAACCAAGACCCTCAACTTTGGGGACCTGATGCTCACAAGTTCAATCCAGAAAGGTTTGCAAAAGGGGCTATTGGAGCATGCAAGGTTCCACAGCTTTATATACCATTTGGAATAGGGCCACGTGTCTGCGTTGGACAGCACTTAGCCATGACAGAACTGAAGGAGATTTTGTCTCTCATTCTGTCAAAGTTTCGCTTCTCTCTCTCATCAAGTTACTGCCATTCACCTGCTTACCATTTGGTCATAGAACCTGCCCATGGAGTTGTTCTTAAGATGTCAAAAATTTAA 1572 0.4249 MVVMEMNTVHVVFGTVLVVLMHVFNSLVLRPRSLRAKLQRQGIQGPPPHFYLGNIPQIKTLLLQVQSAPTTQVKDKEQDVSPSHAWPLTVFPHVQKWIKQYGSMYLFSSGNDQWLMVADIEMVKEIIMYTSLNLGKPTYLSKDLGPLLGQGILASSGQIWAHQRKIIAPELYLDKVKAMVNLIVESTNVTLRSWEARLESEGDISEIKVDEDLRSLSADIIARACFGSNYIEGKEIFSKLRDVQKLLSKVHAGIPGSRYLPNKSNRQLWRLEKEINSKILKLIKQRQEETHEQDLLQMILEGAKNCEGSDGFFSNSISRDRFMIDNCKNIFFAGYETTAITASWCLMLLATHQDWQDRARAEVLQVCGKSAPDATMLKSLKTLTMVIQETLRLYSPQAHVVRTAFQDINLKGMLIPKGMNIQIPIPLLNQDPQLWGPDAHKFNPERFAKGAIGACKVPQLYIPFGIGPRVCVGQHLAMTELKEILSLILSKFRFSLSSSYCHSPAYHLVIEPAHGVVLKMSKI 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01515 523 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01515 523 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01515 523 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01515 523 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01515 523 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01515 523 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01515 523 SUPERFAMILY Cytochrome P450 86 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01515 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Cca01g01515 523 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01515 523 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01515 523 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01515 523 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01515 523 Pfam Cytochrome P450 94 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01515 523 Gene3D Cytochrome P450 32 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01515 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 518 - -
Cca01g01515 523 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01515 Cca-Chr1 32758497 32762579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01515 122 520 Cytochrome P450 AT5G24900 47.561 4.17e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01515 K24544 - gmx:100780335 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01515 01 32758497 32762579 Cca01g01515 01 32758497 32762579 ECH