Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01514 ATGGAAGTGAGCACCATACAAGTTGTGTTGGTAGCAGTTTTGGGGGTGTTGATGCATGTCTTGAATGTCTTGGTGTTGAGGCCAAGATCACTGAGAGCAAAGCTTCAGAGGCAGGGGATTCATGGGCCTTCACCTCACTTCTACTTTGGCAACATCCCACAAATTAAGGCTCTTTTGCTTCAAGTTAAGTCAGCACCAACCACACATGTCAAAAACAGAGAGGAAGATGTTTCTCTTTCACATGCATGGCCTTTCACTCTCTTCCCTCATATTCAAAAGTGGATCCAACAATATGGTCCCACATACACGTTTTCTTCTGGGACTATACAGTGGCTAATGGTGGCAGATATAGATATGGTGAAGGAAATCATCATGTACACCTCTTTGAATCTAGGGAAGCCTAATTATCTTTCCAAAGATCTGGGGCCACTCTTTGGCCAAGGTATATTGACATCAAGTGGCCAAATTTGGGCTCATCAGAGGAAGATAATTGCCCCTGAACTATACCTTGATAAGGTGAAGTCAATGGTTAATCTGATAGTTGAGTCAACAAATATAACACTGAGGTCTTGGGAGACTAGACTTGAAAGTGAGGGAATAGTTTCGGAGATTAAAATTGATGAAGATCTACGCAGTTTGTCGGCTGACATAATTGCCAGAGCTTGTTTTGGGAGCAATTACATTGAAGGAAAAGAAATATTCTCAAAGCTTAGAGATCTTCAAAAGCTCCTTTCCAAGATATTTGCTGGAATTCCTGGTTATCGATACTTGCCAAACAAAAGCAACAGACAGATATGGAGATTGGAGAAAGAGATAAACTCAAAGATATTAAAGCTCATAAAACAACGCCAGGAGGAAACTCATGAGCAGGATCTCTTACAAATGATACTTGCAGGTGCAAAGAATTGTGAGGCTAGTGATGGCTTGTTATCAGATTCCAAGTCACATGACAGGTTTATGATTGATAACTGCAAAAATATATTCTTTGCTGGACATGAGACTACTGCAATTACAGCATCATGGTGCTTAATGCTGTTAGCATTACACCAAGATTGGCAAGATCGTGCACGTGCTGAGGTTCTTGAAGTTTGTGGAAATGGTGCTCCAGATGCAAGTATGCTTAGAAGCCTGAAAACGTTAACCATGGTGATTCAAGAGACATTGAGGCTTTATCCACCAGCAGGATTTGTTGTTAGAAAAGCTTTGGAAGATGTTAATTTAAAAGGCATAGTGATTCCAAAAGGAATGAATATTCAGATTCCAGTCCCAGTTCTGCAGCAAGACCCTCAATTCTGGGGGCCAGATGCTCACAAGTTCAATCCTGAAAGATTTGCAAATGGGGTGCTTGGAGCTGGTAAGTTTCCACAAGCCTATATACCATTTGGAGCCGGGTCACGTGTCTGCGTTGGACAGCACTTAGCCATGACAGAACTGAAGGTCATTTTGTCTCTCATTCTGTCAAAGTTTCGCTTCTCTCTCTCACCAAGTTACAATCATTCACCTGCCTTCCATTTGGTTATAGAACCTGGCCAAGGAGTTTTTCTTAAGATGACAAGAATTTGA 1563 0.4152 MEVSTIQVVLVAVLGVLMHVLNVLVLRPRSLRAKLQRQGIHGPSPHFYFGNIPQIKALLLQVKSAPTTHVKNREEDVSLSHAWPFTLFPHIQKWIQQYGPTYTFSSGTIQWLMVADIDMVKEIIMYTSLNLGKPNYLSKDLGPLFGQGILTSSGQIWAHQRKIIAPELYLDKVKSMVNLIVESTNITLRSWETRLESEGIVSEIKIDEDLRSLSADIIARACFGSNYIEGKEIFSKLRDLQKLLSKIFAGIPGYRYLPNKSNRQIWRLEKEINSKILKLIKQRQEETHEQDLLQMILAGAKNCEASDGLLSDSKSHDRFMIDNCKNIFFAGHETTAITASWCLMLLALHQDWQDRARAEVLEVCGNGAPDASMLRSLKTLTMVIQETLRLYPPAGFVVRKALEDVNLKGIVIPKGMNIQIPVPVLQQDPQFWGPDAHKFNPERFANGVLGAGKFPQAYIPFGAGSRVCVGQHLAMTELKVILSLILSKFRFSLSPSYNHSPAFHLVIEPGQGVFLKMTRI 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01514 520 SUPERFAMILY Cytochrome P450 83 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01514 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Cca01g01514 520 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 515 - -
Cca01g01514 520 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01514 520 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01514 520 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01514 520 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01514 520 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01514 520 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01514 520 Gene3D Cytochrome P450 29 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01514 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 515 - -
Cca01g01514 520 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01514 520 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01514 520 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01514 520 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01514 520 Pfam Cytochrome P450 91 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01514 Cca-Chr1 32749257 32752901 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01514 119 517 Cytochrome P450 AT5G24900 48.537 1.59e-138 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01514 K24544 - gmx:100780335 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01514 01 32749257 32752901 Cca01g01514 01 32749257 32752901 ECH