Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01470 ATGGCACCGAAACAAAACAAGAAGCGTCTCTTCCATACGGAAGAACCATccacagccacagccacagccacagccacagcTTGTTCCTCTTCCGAAAAACACACGCAACGTTCCACCGAAGCACCAGCGGCACAAGAGTCTTCTTCTCCCAAAGTGAAGGCCAAGCGGGTGACGAAGAAGAAGGCAAGCAGCGACGAAGAGACGGAGGAGGACAGGATAAAGGCCCCGGATGGGCAGTCGAAGCTGTTCCAGAGGATCTGGAGCGAGGAAGACGAGCTCTTGATTCTGAAGGGCATGGCCCAGTTCATCTCAACCACCGGCAACGACCCTTACAAGCACGCAGACTCCTTCCACGATTCCATCAAGAACATGCTCCACGTGGCAGCCTCCATCAACCAGCTCAAGGAGAAGATCCGCCGCTTGAAGAAGAAGTTCGAGGCTAATTCTCGCCGAGGGAAGAACGGCGACGACCCCCACTTCTCCAAACCTCACGACTCCACAATGTTTCACTTGTCCAAGATGGTCTGGGCTGTGAAGCCCAAGCCCAAGCCCAGGCCCGGTGAGAAACAATTGGTGATGGTGAAGTCTCTTATCGGTAATGACCTAGACTCGCTTTACCGCGAAATAGCCGGTATGAAGGAACTGGGTGAGGATGAGATGAAGAAAGGTTTGGCATTGATTGGAGAGTCCAAGAGGAAAGAGTTGGAGGGAAGGTGGAGCCAACTGCGTCTTGCTCAGCTTCAGCTTGTTTCAGATCGTTCCCAACTCGCCGGGGAGATCGTTAAGCTGATACATGAAGCGCTTCACTGA 810 0.5086 MAPKQNKKRLFHTEEPSTATATATATACSSSEKHTQRSTEAPAAQESSSPKVKAKRVTKKKASSDEETEEDRIKAPDGQSKLFQRIWSEEDELLILKGMAQFISTTGNDPYKHADSFHDSIKNMLHVAASINQLKEKIRRLKKKFEANSRRGKNGDDPHFSKPHDSTMFHLSKMVWAVKPKPKPRPGEKQLVMVKSLIGNDLDSLYREIAGMKELGEDEMKKGLALIGESKRKELEGRWSQLRLAQLQLVSDRSQLAGEIVKLIHEALH 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01470 269 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Cca01g01470 269 PANTHER STOREKEEPER PROTEIN 22 268 - -
Cca01g01470 269 Pfam Protein of unknown function, DUF573 83 176 IPR007592 GO:0006355
Cca01g01470 269 PANTHER BNAANNG10740D PROTEIN-RELATED 22 268 IPR007592 GO:0006355
Cca01g01470 269 MobiDBLite consensus disorder prediction 15 46 - -
Cca01g01470 269 Coils Coil 124 151 - -
Cca01g01470 269 MobiDBLite consensus disorder prediction 1 76 - -
Cca01g01470 269 MobiDBLite consensus disorder prediction 59 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01470 Cca-Chr1 30929161 30929970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01470 6 267 GeBP Transcription Factor Family AT1G61730 28.859 2.33e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Cca01g01470 DUF573 9e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01470 - - ccaj:109806637 517.694