Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01469 ATGGCATCTACATTTCTCACATTACCAACTTCCTTTCTACACAAAAACAATGCCATCTCTTTCTCTAACAAGAGACCCTCATTTTTGCAGAGGAGCTCTCTGAAGATAACCGCAATTTCCAAAAAATGGGAACCCACTAAGGTTGTGCCTCAGGCTGATAGAGTTCTTATCCGTCTGGAGGAGCTATCAGATAAAACAGCTGGTGGAGTTTTGCTGCCCAAGTCAGCTGTGAAATTTGAGCGATACCTTGTAGGAGAAGTCCTCACCGTTGGTGATGAGGCTGGAGAACTAAAGGCTGGAACAAAGGTACTATTCACTGACATGAATGCTTATGAGGTGGATTTGGGAACTGATGCAAAACACTGCTTCTGTAAAGCAAGTGACTTATTGGCCGTGGTTGAGTAG 405 0.4395 MASTFLTLPTSFLHKNNAISFSNKRPSFLQRSSLKITAISKKWEPTKVVPQADRVLIRLEELSDKTAGGVLLPKSAVKFERYLVGEVLTVGDEAGELKAGTKVLFTDMNAYEVDLGTDAKHCFCKASDLLAVVE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01469 134 PANTHER 10 KDA CHAPERONIN 1, CHLOROPLASTIC-RELATED 15 133 - -
Cca01g01469 134 Gene3D GroES chaperonin 43 134 IPR037124 GO:0006457
Cca01g01469 134 PANTHER 10 KDA HEAT SHOCK PROTEIN 15 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Cca01g01469 134 CDD cpn10 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Cca01g01469 134 Pfam Chaperonin 10 Kd subunit 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Cca01g01469 134 SMART Cpn10_2 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Cca01g01469 134 SUPERFAMILY GroES-like 47 134 IPR011032 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01469 15 134 Calmodulin-binding Proteins AT5G20720 27.273 2.54e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01469 K04078 - gmx:100306026 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01469 01 30896723 30901379 Cca01g01469 01 30896723 30901379 ECH