Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01466 ATGAGCCCTTCCTCTTCCCTTTTGTTCACTTTCACAATCCTCTTTTGCTCTCTCCATTCCTTTGTTCGTGCTAACCGTCTCATCCAACAAACATGCAAGAATTGCTCAAAAACCGACCCCAACATAAGCTACAAATTTTGCGTAACATCTTTCCAATCGGATCATAGGAGCCACTACGCCAAAACCCTCCAAGAACTAGGCCTAATCTCCATCAAGATCATTAGGCACAACGTGACCGATACCAACAACCACATCAACGAGCTTTTGAAGAAAGAGAAGAGCTTAGACCCGTTTATCAAAGAGTGCTTAGATGATTGCCTTGAAGTCTATTCCGACACCGTTTCAACGTTTAGAGAAGCCATTAGAGACTACAAAGCAAAACGTTACGCTGATTGCAATGTCAAATTGAGCTCGATCATTGATGCCTCCACCACATGTGAAGATGGATTCAAGCAAAAGAATGATTCCATTTCGCCACTAACGAAGAGAAACAAGGACACGTTTCAGCTTTCCGCTATAGCACTTTCGATTGTTAACATGCTCATCAGTGCGGATAAATTAGAGGGTGCATTTTGA 576 0.4253 MSPSSSLLFTFTILFCSLHSFVRANRLIQQTCKNCSKTDPNISYKFCVTSFQSDHRSHYAKTLQELGLISIKIIRHNVTDTNNHINELLKKEKSLDPFIKECLDDCLEVYSDTVSTFREAIRDYKAKRYADCNVKLSSIIDASTTCEDGFKQKNDSISPLTKRNKDTFQLSAIALSIVNMLISADKLEGAF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01466 191 Pfam Plant invertase/pectin methylesterase inhibitor 27 177 IPR006501 GO:0004857
Cca01g01466 191 SMART PMEI_2 23 177 IPR006501 GO:0004857
Cca01g01466 191 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 5 180 - -
Cca01g01466 191 CDD PMEI-Pla_a_1_like 32 180 IPR034088 -
Cca01g01466 191 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 182 IPR035513 -
Cca01g01466 191 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 181 IPR006501 GO:0004857
Cca01g01466 191 PANTHER PECTINESTERASE 5 180 - -
Cca01g01466 191 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 181 IPR035513 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01466 69 154 Carbohydrate Esterase AT3G14310 30.851 8.94e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01466 - - gmx:100306248 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01466 01 30835766 30836429 Cca01g01466 01 30835766 30836429 ECH