Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01447 ATGGATATGCCAAAATACGATAACTTCTCTACTATTGTGACCGTGGCCAAATGGGGTCGCTCAGTCTACATAAACATTCAGAAATTTGTGCAGTTTCAGCTAACTGTAAATGTTGTTGCTTTGATCGTCAATTTCTCTTCTGCCTGTTTGACCGGAAATGCTCCCCTCACTGCGGTTCAACTTCTATGGGTCAACATGATTATGGACACTCTTGGAGCACTTGCTCTAGCCACTGAACCTCCTAATGACGAGTTGATGAAAAGACCACCTGTTGGTAGGAAAGGAAACTTTATCAGTAATGTGATGTGGAGGAATATCTTGGGGCAGTCTATATATCAATTTGTCGTAATATGGTTCCTCCAGACCAGAGGAAAAGTAACATTTCATCTTAATGGCCCAGATTCTGATATGACATTGAATACACTCATTTTCAACTCATTTGTGTTCTGTCAGGTTTTCAATGAGATTAGTTCCAGGGATATGGAGAGGATAAATGTTTTTCAAGGTATACTGAAGAATTATGTGTTTGTTGCTGTCCTCACCTCTACTGTCATCTTCCAAATTGTAATTGTTGAATTCTTGGGCACCTATGCAAACACATCTCCACTTAGTTTGAAGCAATGGTTTGGTAGCATTCTCCTTGGAGTTCTTGGCATGCCAATTGCAGCAGCTCTAAAGATGATTCCCGTGGGATCTGTCTAA 702 0.406 MDMPKYDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRPPVGRKGNFISNVMWRNILGQSIYQFVVIWFLQTRGKVTFHLNGPDSDMTLNTLIFNSFVFCQVFNEISSRDMERINVFQGILKNYVFVAVLTSTVIFQIVIVEFLGTYANTSPLSLKQWFGSILLGVLGMPIAAALKMIPVGSV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01447 233 Gene3D - 2 229 - -
Cca01g01447 233 PANTHER CALCIUM-TRANSPORTING ATPASE 7 230 - -
Cca01g01447 233 SUPERFAMILY Calcium ATPase, transmembrane domain M 19 229 IPR023298 -
Cca01g01447 233 Pfam Cation transporting ATPase, C-terminus 54 228 IPR006068 -
Cca01g01447 233 PANTHER CATION TRANSPORTING ATPASE 7 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01447 Cca-Chr1 30080896 30083780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01447 7 232 Primary Pumps ATPases AT1G27770 84.513 2.71e-135 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01447 K01537 - gmx:100810758 438.728