Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01431 ATGGTTGGGGAATCAAGAAAGTGGGTGATGCTTGTGGCATCAATATGGATACAAGCATTCACAGGGACAAACTTTGACTTCTCATCCTACTCATCTGAACTCAAATCTGTCCTTGACATAACTCAGCTTCAGCTCAACTATCTCTCTGTGGCATCTGACATGGGAAAGGCCTTTGGCTGGTGTTCTGGCCTCTCTCTCATGTTCTTCCCTTTGTGGGTAGTCATGTTCATGGCTGCTTTCTTGGGACTTGTTGGCTATGGCTTCCAATGGCTTCTCATTCATAGATTCATCTCTTTGCCTTATGCCCTGGTCTTTTTCCTATGCCTCATTGCTGGTTGCAGCATCTGCTGGTTCAACACCATCTGCTATGTCTTATGCATCAAGCACTTTCCTGCAAACCGTTCCCTTGCACTATCTTTGGGCATTGGTTTCAATGGTTTAAGTGCAGCTTTGTACACTCTCATTGCCAATGCAATAAACTCAAATGATGATACCCTCTATCTATTACTCAATGCCATTGTTCCTCTACTAATTTCTGGCCTAGTTCTCATCCCAATTCTCCATCAACCACAGCCTCAACCTCATTCTGCAGACACCATTTGGCGCGATTCATCATTTTTTCTTTGCCTCAACATCCTTGCCCTTGTCACAGGCCTCTACCTCCTCATCTCATATTCCTTCTCTTCTTCCACAGCCATTGCTCGTGCCATCCTTGTAGGTGCCATTTTTCTCCTTGTTTTGTTCTCATTCTTGCCTGCCATTTTGAAGTCTAGAGAATGGTCTTGCTTTGCTGTCCTCATGAGGTTTTCCTTCTATTCAAGATTCCCTCGCGCTGACCCCGATGACAATGAGCTTTACAAAGAGCTTATCGGCATTGAGGACAGGGCGAGGAGTCAAAGTGCACAAAGCACAGAAGAAAAGGAATGTTGTCTTGTGAATGTATTAGAGAGAGAGCAGATTACAATGCTGGGGGAAGAGCATTCAACTAAGTTGCTAATAAGTAGGTGGGACTTTTGGCTGTACTACATTGCCTATTTTTGTGGAGGAACTATTGGATTGGTTTATAGCAACAACTTGGGGCAAATTTCACAATCACTAGGACAGTATTCTCAGACTTCTTCTCTTGTCACACTCTACTCTACATGTTCCTTCTTTGGTCGCCTTCTTGCAGCTGCACCCGACTTCTTAAGCAGGAGGATACACTTTGCAAGAACAGGATGGTTTGCAGTAGCCCTGGTGCCAACACCAATTGCATTCATTTTACTGTCCATATCTGGCAGTGAGCCAGCACTGCACATAGGCACTGGCTTGATTGGTCTGAGTTCAGGCTTTGTGTTTTCTGCAGCAGTGTCTATTACTTCAGAGCTATTTGGTGCAAACAGTGTTGGTTTGAACCACAACATCCTCATCACCAACATTCCTCTAGGTTCATGCCTCTATGGCCTTCTTGCAGCCTTGGTTTATGATTCCAATGGAACAATGAACTCAAGCCATGCAATTTGGCTGCAAGAAATGTCCATGTGCATGGGAAGGAAGTGCTACCTGCAAACCTTTATATGGTGGAGCTGCATCTCAATGGTGGGATTGGCTTCAAGCTTCTTGCTTTTCTTAAGGACTAAACAAGCCTATCACAATTTTGAAAGAAATAGTAGTAATAGTGATAGAAACAGGACTGAGACAATGTAG 1686 0.4413 MVGESRKWVMLVASIWIQAFTGTNFDFSSYSSELKSVLDITQLQLNYLSVASDMGKAFGWCSGLSLMFFPLWVVMFMAAFLGLVGYGFQWLLIHRFISLPYALVFFLCLIAGCSICWFNTICYVLCIKHFPANRSLALSLGIGFNGLSAALYTLIANAINSNDDTLYLLLNAIVPLLISGLVLIPILHQPQPQPHSADTIWRDSSFFLCLNILALVTGLYLLISYSFSSSTAIARAILVGAIFLLVLFSFLPAILKSREWSCFAVLMRFSFYSRFPRADPDDNELYKELIGIEDRARSQSAQSTEEKECCLVNVLEREQITMLGEEHSTKLLISRWDFWLYYIAYFCGGTIGLVYSNNLGQISQSLGQYSQTSSLVTLYSTCSFFGRLLAAAPDFLSRRIHFARTGWFAVALVPTPIAFILLSISGSEPALHIGTGLIGLSSGFVFSAAVSITSELFGANSVGLNHNILITNIPLGSCLYGLLAALVYDSNGTMNSSHAIWLQEMSMCMGRKCYLQTFIWWSCISMVGLASSFLLFLRTKQAYHNFERNSSNSDRNRTETM 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01431 561 SUPERFAMILY MFS general substrate transporter 7 541 IPR036259 -
Cca01g01431 561 Pfam Nodulin-like 7 248 IPR010658 -
Cca01g01431 561 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 551 - -
Cca01g01431 561 Gene3D MFS general substrate transporter like domains 333 549 IPR036259 -
Cca01g01431 561 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01431 Cca-Chr1 29426399 29432161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01431 1 550 Nodulin-like Gene Family AT1G31470 53.804 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01431 - - gmx:100804951 909.827