Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01385 ATGCGCGCTCACCCTCTCAAGACTCTCAAACCTAAAACCCTCTCTACAGTCAAAAAGTACCAACTCACGCACTTCCTTGGCCGCGGGAACTTTACCAAGGTCTACCAGGTGCACTCGCTGCTCGACGGCGCCACGGTTGCGGTAAAAGCCATCGACAAGTCCAAGACGGTCGACACCGCCATGGAGCCTCACATCATTCCTTGCCACCATGACCAAGATCTACCTTATCGTGGACTTCGCCGACGGCGGCGAGCTCTTCTCCAAGCTCTCCTGCTGCGGCCGCCTCCCAGAGTCCCTCGCGTGCCGCTACTTCGCGCAGCTCGTTCTCTCTATGCTGGTTCCCTCTACTACAAGTCCTCTTTGCCTGATGAAGCTGTGTATGACAAGGAGAGACCTGGAGTTACATGGCCGAAGCAGTTAAATGCTCCCCTTGCAGCCGTTGATCCTGAGATTGCTAATATAATTGAGCTTGAGAAAGCTAGGCAATGGAAGGGGCTGGAACTGATACCGTCTGAGAATTTCACTTTTGTGTCTGTCATGCAAGCGGTTAGGTCCATCATGACCAACAAATACAGTGAGGGGTATCCTGGTGCAAGATATTATGGTGGAAATGAGTATATTGACATGGCTGAAACACTGTGCCAGAAGCGTGCCCTGGAAGCGTTTAGATTGGATCCCGCTAAATAG 687 0.5211 MRAHPLKTLKPKTLSTVKKYQLTHFLGRGNFTKVYQVHSLLDGATVAVKAIDKSKTVDTAMEPHIIPCHHDQDLPYRGLRRRRRALLQALLLRPPPRVPRVPLLRAARSLYAGSLYYKSSLPDEAVYDKERPGVTWPKQLNAPLAAVDPEIANIIELEKARQWKGLELIPSENFTFVSVMQAVRSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01385 228 Gene3D Aspartate Aminotransferase, domain 1 148 172 IPR015422 GO:0003824
Cca01g01385 228 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL 112 228 - -
Cca01g01385 228 SUPERFAMILY Protein kinase-like (PK-like) 12 62 IPR011009 -
Cca01g01385 228 Gene3D - 173 227 IPR015421 GO:0003824
Cca01g01385 228 SUPERFAMILY PLP-dependent transferases 136 227 IPR015424 -
Cca01g01385 228 Pfam Serine hydroxymethyltransferase 145 228 IPR039429 -
Cca01g01385 228 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 112 228 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Cca01g01385 228 Gene3D Phosphorylase Kinase; domain 1 15 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01385 Cca-Chr1 27319540 27321191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01385 19 66 CBL-interacting serine-threonine protein kinases AT4G14580 52.083 4.83e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01385 K00600 - ccaj:109793928 245.743