Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01375 ATGTCACACACTGCTTCTTTCACTGAGCTTCTCACTGGTGGGATTGGGAGCACAGCAACCACAAGTCCTAATGGATCATCAGTTCATCAGATCCATGATGAGGCCAATCTATTCAACAAGGGAAGGCAACATTGGTCCTCAACAGTGACTCCTAGTCCTATGGACTACTTCAGCTCAGGCCTCTTGGTTTCATCTGCAAGAACAGCACAACACCAATATGCCCTTCCATTCAGTGGAGGAGACCAGATGCAGCATTTCTCCTTCATGTCTGACCATCTTAACATGCCAGCTATGGTTACTTCTTCTCAGCCTCAGCCTAGCGGGGGTGACTACAACCTCAACTTCAGCATCTCTAATGGTTACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCCTTTTTGCCTCACCTCCAGAGGTTTCAAACCATAGACGGATCATCCAATATACCTTTCTTTATAGGAGCTCCTGCTTCTGCTTCTGCTTCTCCAACCATGGACCATCACCAGCTTCAGTTCTCACCTGTCTTCGATGGAACCAGACATTCTGACCACAAGGGCAAAGGCAAGAACTAA 573 0.4764 MSHTASFTELLTGGIGSTATTSPNGSSVHQIHDEANLFNKGRQHWSSTVTPSPMDYFSSGLLVSSARTAQHQYALPFSGGDQMQHFSFMSDHLNMPAMVTSSQPQPSGGDYNLNFSISNGYNRGTLQSNSPSFLPHLQRFQTIDGSSNIPFFIGAPASASASPTMDHHQLQFSPVFDGTRHSDHKGKGKN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01375 190 PANTHER TRANSCRIPTION FACTOR TCP24 1 190 - -
Cca01g01375 190 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 190 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01375 Cca-Chr1 27093920 27094492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01375 39 190 TCP Transcription Factor Family AT4G18390 37.234 3.13e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01375 - - ccaj:109792489 394.045