Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01374 ATGGGTGGTGGTGGAGCTGAAGAAGGGAACAATTTGGAATTCACTCCCACTTGGGTTGTTGCTGTTGTTTGCTCTGTCATCGTTGCTGTTTCATTTGCCGCTGAGCGTTTTATTCACTATGGAGGGATTTTTCTCAAGAAGAAGAATCAGAAGCCACTCTTTGAAGCTCTGCAAAAGATCAAAGAAGAGTTGATGCTGTTGGGATTTATTTCTCTGCTACTGACAGTAACACAAAATGGGATAGTCAAAATTTGTGTTCCAGTGAGTTGGACTCACCATATGCTTCCCTGCAGCTTCGATCTTAAAGAAAAGGAGGAATCAACAAAAACCACATCACATTTTCAGACTTTTTTTTCTTCCTCTAATATTTCTGGCATAGCTAGACGCCTTTTAGAAGAGAGTAAGAGTGAGAGTGAGAATCACGAACCATCAACAGTGACAAAACTTGGACACTGTGCTGCCAAGGGCAAGGTTCCTCTGTTATCCGTGGAGGCATTGCATCACTTGCATATCTTTATTTTTGTCCTAGCTATCGTCCATGTAGCATTTTGTGTTCTCACTGTAGTTATTGGAGGGTTACAAATTCGTCAGTGGAAGCACTGGGAAGACTCTATTGTAAAGGAAAATTATGAAACACAACCAGTTCTTGAACCAACAGTGACTCATGTTCAAGAACACGCTTTCATTCAGAATCGTTTTACTGGTTTTGGCAAAGATTCTGCTGTTCTAGGTTGGGTGAAATCATTTTTCAAGCAATTTTATGGATCTGTGACAAAATTAGATTATGTGACATTGAGGCTTGGTTTCATTATGacccactgcagaggaaatccaaagtttaattttcataaatacatgattcgtgcccttgaagatgatttcaaaaaagttgttggtataagTTGGTATCTTTGGATATTTGTGGTCATCTTCTTGTTGCTTAATATCAATGGTTGGCACACATATTTCTGGATTGCTTTCATTCCTGTCATTCTTCTACTTGCTGTGGGTACAAAGTTGGAGCATGTAATAATTCAATTGGCTCATGAAGTAGCTGAGAAGCATTCAGCCATAGAAGGTGAATTAGTTGTTCAACCAAGAGATGATCACTTTTGGTTCAAACGACCCCACATTGTCCTCTTCTTGATTCACTTCATCCTTTTCCAAAATGCTTTTGAGATAGCATTTTTCTTCTGGATATGGGTCACATATGGCTTTGACTCCTGTATAATGGGAAAAGTGCGTTACATTGTTCCAAGACTCGTTATTGGGGTATTTATTCAAATACTATGTAGCTACAGCACCCTACCACTTTATGCAATCGTTACACAGATGGGAACTCACTTTAAGAAGGCTATATTTGATGACCAAGTGCAAGCACGACTTGTTGGTTGGGCACAAAAAGCAAAGAAAAAAGGATTAAGAGGTGATAACAATGGACAAGGAAGTTCTCATGCAGGTGCTGGAATTCAACTAGGACCAATGTTTAGGAGAGCTTCTGCCACAGAAGACAACGTTGTTGTTCCCAGAAATGATGGGTCTGAATGA 1548 0.3766 MGGGGAEEGNNLEFTPTWVVAVVCSVIVAVSFAAERFIHYGGIFLKKKNQKPLFEALQKIKEELMLLGFISLLLTVTQNGIVKICVPVSWTHHMLPCSFDLKEKEESTKTTSHFQTFFSSSNISGIARRLLEESKSESENHEPSTVTKLGHCAAKGKVPLLSVEALHHLHIFIFVLAIVHVAFCVLTVVIGGLQIRQWKHWEDSIVKENYETQPVLEPTVTHVQEHAFIQNRFTGFGKDSAVLGWVKSFFKQFYGSVTKLDYVTLRLGFIMTHCRGNPKFNFHKYMIRALEDDFKKVVGISWYLWIFVVIFLLLNINGWHTYFWIAFIPVILLLAVGTKLEHVIIQLAHEVAEKHSAIEGELVVQPRDDHFWFKRPHIVLFLIHFILFQNAFEIAFFFWIWVTYGFDSCIMGKVRYIVPRLVIGVFIQILCSYSTLPLYAIVTQMGTHFKKAIFDDQVQARLVGWAQKAKKKGLRGDNNGQGSSHAGAGIQLGPMFRRASATEDNVVVPRNDGSE 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01374 515 MobiDBLite consensus disorder prediction 472 491 - -
Cca01g01374 515 Pfam Mlo family 10 481 IPR004326 GO:0006952|GO:0016021
Cca01g01374 515 PANTHER MLO-LIKE PROTEIN 1 1 515 IPR004326 GO:0006952|GO:0016021
Cca01g01374 515 PANTHER MLO-LIKE PROTEIN 1 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01374 Cca-Chr1 27061867 27068939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01374 1 513 MLO family AT4G02600 64.695 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01374 K08472 - gmx:100787826 895.575