Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01357 ATGAGTGACAGTATGGTCAAGGCAAGTTGCACTGTGTGTTTGTGTTTGTGTTTGGTCTTGCTTCACATTTTCCTGTGCTTTGTGCCAACACAATCAGCCCCTGAAAGTGCCACTGTGACACAGATTCCTGGCTTCAATGGAATACTACCCTCCAAGCACTATGCTGGGTATGTGACAGTGGATGAAAGTCATGAAAGGAACTTGTTTTACTATTTTGTTGTATCAGAGGGTAAACCTGCTGAGGACCCTGTGGTTCTGTGGCTTAATGGGGGACCTGGCTGCTCTAGCTTTGATGGATTCATATATGAGCATGGTCCCTTCAATTTTGAGGCAGCAAAGACAAGGGGGGGCCTGCCCTCACTGCACCTCAATCCATACAGCTGGTCAAAGGTTTCCAGTGTTATATATTTGGATTCTCCTGCTGGTGTGGGGTTTTCATACTCAAAGAATAAAACTGATTACATAACTGGAGACAAAAAGACTGCCTCTGATACACATTCCTTTCTCCTTAAGTGGTTTGAACTATACCCCGAGTTTCTTGCCAATCCGTTCTTCATTGCTGGAGAGTCATATGCAGGAGTTTATGTGCCTACTCTTGCTTCTGAAGTAGTGAAAGGAATTGAAGCTGGTGTGACGCCCAAACTGAATTTGAAGGGTTACATGGTGGGAAATGGTGTTACAGATGAAGAGTTTGATGGCAATGCTCTTGTTCCATTTGTACATGGGATGGGACTTATCTCAGATGATCTGTTTGAGGAGATTAGCAAAGAATGCAATGGGAATTTCTATAATCCAACAAGTGATAATTGTTCTCTCAAGCTTCTAAAAGTTGATGAGGACATTGATGAGATAAACATATATAACATTCTAGAACCGTGCTATCATGGCACAGAGGCAGAGAAGATTACAGAATCCTATATTAGGTTGCCATCTAGCTTCCGGAAGTTGGGCGAGACAGAAAGACCTTTTCCTGTGAGGAAAAGAATGTTTGGTCGTGCTTGGCCCCTAAGAGCACCTGTGAGAGATGGCATTGTACCAACTTGGCCACAATTGATGAATAGTGAGAGTGCTCCACCATGCACTGATGATGAGATTGCAAACTCATGGTTGAACAATGAAGAAGTCAGGAAAGCAATTCATACTGCACAGAAAAGTGTGGTCAGTAGTTGGGATTTATGCACAGACAGAATTTCCTTTGATCATGATGCTGGCAGCATGATCAGTTACCACAAGAACTTAACTTCCAAAGGTTATCGAGCACTTATATTCAGTGGCGATCATGACATGTGTGTTCCATTCACGGGGAGTCAAGCGTGGACGAGATCAATTGGATACAAGATTGTTGATGAATGGAGGCCTTGGTCATCCAATGGTCAAGTTGCAGGGTTTACACAGGGCTACGACAACAATCTTACTTTTCTAACCATAAAGGGAGCTGGGCACACTGTTCCAGAATATAAACCACGAGAGGCATTGGACTTTTACAAACGCTTTCTAGATGGATCGTCAATATGA 1515 0.4323 MSDSMVKASCTVCLCLCLVLLHIFLCFVPTQSAPESATVTQIPGFNGILPSKHYAGYVTVDESHERNLFYYFVVSEGKPAEDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAAKTRGGLPSLHLNPYSWSKVSSVIYLDSPAGVGFSYSKNKTDYITGDKKTASDTHSFLLKWFELYPEFLANPFFIAGESYAGVYVPTLASEVVKGIEAGVTPKLNLKGYMVGNGVTDEEFDGNALVPFVHGMGLISDDLFEEISKECNGNFYNPTSDNCSLKLLKVDEDIDEINIYNILEPCYHGTEAEKITESYIRLPSSFRKLGETERPFPVRKRMFGRAWPLRAPVRDGIVPTWPQLMNSESAPPCTDDEIANSWLNNEEVRKAIHTAQKSVVSSWDLCTDRISFDHDAGSMISYHKNLTSKGYRALIFSGDHDMCVPFTGSQAWTRSIGYKIVDEWRPWSSNGQVAGFTQGYDNNLTFLTIKGAGHTVPEYKPREALDFYKRFLDGSSI 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01357 504 Gene3D alpha/beta hydrolase 31 323 IPR029058 -
Cca01g01357 504 SUPERFAMILY alpha/beta-Hydrolases 38 502 IPR029058 -
Cca01g01357 504 ProSitePatterns Serine carboxypeptidases, histidine active site. 471 488 IPR033124 GO:0004185
Cca01g01357 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Cca01g01357 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Cca01g01357 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Cca01g01357 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 471 484 IPR001563 GO:0004185|GO:0006508
Cca01g01357 504 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 25 502 - -
Cca01g01357 504 ProSitePatterns Serine carboxypeptidases, serine active site. 186 193 IPR018202 GO:0004185
Cca01g01357 504 Pfam Serine carboxypeptidase 43 501 IPR001563 GO:0004185|GO:0006508
Cca01g01357 504 Gene3D - 357 503 - -
Cca01g01357 504 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 502 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01357 Cca-Chr1 26165040 26175343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01357 365 504 Calmodulin-binding Proteins AT2G22960 47.143 1.00e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01357 K16296 - gmx:100792057 926.391