Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01338 ATGCAGCCCGGCCAATTGCCGTTTGCCCAATTATTTTACAAGAACTTCGGATATACTTTCACTTTAACATTTGCTGTTCAAGGATTGGTTAATACTTTTGGAGATCTTCGTGGAACTTTGGCTGCTGTTGAGAGGATCAACTCTGTTTTGTCTGGAGCTCCAGTTGATGATGCCCTTGCTTATGGCTTAGAAAGAGAACTGAAACAAAAAACAATGGATGATGAAAGCTATAAATTGGTCTTATCTAATATTTCTACTGAGAATAACCAAAAGAATTATTTACATTACATGTCAGCTCTTAAAACATCAAGCAATTTGTGTAACTTAGCTTGGTCTGGAGATATTTGTCTTGAAGACGTATATTTCTCTTATCCTTTAAGGCCAGATGTGGAAATCTTAAATGGCCTAAATTTAAGGCTAAAATGTGGAACTGTAACTGCTCTGGTGGGTCCTAGTGGTGCCGGAAAAAGTACAGTAGTACAGTTATTGTCTCGTTTTTATGAGGAGGTTTTATCGAGGAGTTACACTTTTGCTCTAATTATAAGTCTGAAGGAGGAAACCACCAACCACCTTGAAGGCCCCTTACTAATGTCGGACTTTTATGGAGATAAAGAGGAAGTGAGTTATCTTGCTAATAGGTGTGGAATAATCATGAGCAGTAGAATTGACCTTTAA 675 0.3778 MQPGQLPFAQLFYKNFGYTFTLTFAVQGLVNTFGDLRGTLAAVERINSVLSGAPVDDALAYGLERELKQKTMDDESYKLVLSNISTENNQKNYLHYMSALKTSSNLCNLAWSGDICLEDVYFSYPLRPDVEILNGLNLRLKCGTVTALVGPSGAGKSTVVQLLSRFYEEVLSRSYTFALIISLKEETTNHLEGPLLMSDFYGDKEEVSYLANRCGIIMSSRIDL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01338 224 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 13 169 - -
Cca01g01338 224 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 13 169 IPR039421 -
Cca01g01338 224 Gene3D - 111 169 IPR027417 -
Cca01g01338 224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 168 IPR027417 -
Cca01g01338 224 Pfam ABC transporter 133 168 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01338 Cca-Chr1 25301978 25304854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01338 113 168 Calmodulin-binding Proteins AT2G36910 53.571 7.44e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01338 K05657 - gmx:100791034 281.182