Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01326 ATGAACAAGAAATTGTTAACAACATTTATGCAAGATCCAGTCTCTCCTTTGATCTATAACCTCCATAAACAACAGGTGTATGGTTCAAAAAAGAAACTATCCAGGTCAGTGTCATTTCCTCTACCTGATTCATCATCAAAAGAACAAGGTTCTTGGGCTATAGGCAATAGTTCTCTACAACAAGGGAAAGGAAAGTTATGTTTGGACAACAAAACACCAAAGTCAGTTCAATTTGAACCCTCAAAAAAATTTTATGTGAGGTCCATGTCATCAGGAGCAAAATGTTTCAATGTAAATGAAGCAACGATGGTAAGAGATGTTAATTGTTCTTCAGGGTCTGCtcagggtcagaatcagaatgaaatcaaacaatttaagaatctgaaacagaaAATAGAGCATGTTACCGGAGAAAGTAGGAAAGAAAAGCTCCGTGTTACTATGGATGCTGTCATTCACAAACTTCCCCAAGGCCATGGGATTTCAGATGATTTAAAGAAGGATTTTTTCAAGAAATTGACTGATCCTAATATTACTAGAGAAGGTGAATACTATCCTGAAAGTTGTAATGAGAGTGATCAATACACTACTCCTTCATTCACCAAGCATCACAGGCACAACATAAGAAGAATCTGGTCTCTTCAAGAACCACTAGAAATTTATTGGCAACTCTATGAGAATAGCTTTAACACACAACCAAATCACCTTCAATCCGTGAACCTAAAATTAAGAACGGAAGAGGCACGTTCACCATTGAGGATGCTTGCACCCTTACAAAGGATGATTTCATTACCTGGTGATCTCCAATCTTTTTCTTATGTTTATCAGAATTGGGAATTTCCTGATATTTCATCTGTGACTAAGCCAATCACAGCTTCCGGGGATGGAACTGTGAGTTCAGCGAATATTTCCTATCAGAAAAAGAAGCTAGACCTTAATTTATGTTCAAAAAGTCAAATTCAGTTAGATACACCTGTAGAAAATTTGATTCAAAAACACCTTGTCGGTGTAGGTGAAAATGATTTAGTGAGTAGCAATATTGTTGAACCAGGATCACATTATCGCAGTAAGATTAATGACAAGGTGGACATGATGAAAACTGATGATTTTGGACACTGCTGTTTAAAAAGTGGCGCCACTTCTAATGACCAATATATTGTGCCAATAAAAGAATACAAGACTGCAACAGCAGCATCAGATTCAAAATCGAATCCGGAACCAGGGGGCAAACTGGATAACATGGTTGAGCAACAAGAGGGTATCGTGGATTCCCTAAAAAGTGCTCAAAAGGTGGAGATTGAAAGCAAGCAGTTAAATTATGAGATTCCTCCTTTTGATGTTGACACAAGAGACAAAGCTGAGTATAATTATGTTAAATATGTACTTGAAATATGTGGACTAACAGGTAAAGATTGCATTTCAGCGTGGCATTCTAGTGACCACCCAGTAGATCCATTACTCTACGAAGAAATGGAAGGTGACCCTGATTTTTGTAGCTATAGCTATGGTCGGTGTAACCACCATGTGTTGTTTGATTTAATTAATGAGACATTGTTGGAACTTTCTGGGAGGTGTTACTGCTGCTGTCCCATGCCATTGTCACAATCTCATCCAATGCCAAAACCAAAAGGGTGCGACACTATTCATAAAGTGTGGACTCATATGAGCAAATCCTTCTGCATGAGATCCATTGCTGGCCTTACAATAGATGATCATGTAGGTCGAGACCTATCGAGGCGTGATGGGTGGCTCAACCTTCACTTGTTTGCTCAGTGTGTGGGTTTGGAGGTTGAAGACTTAATATTTCATGATCTCCTTCAGGAACTAACATGTGACTTGGCTTGA 1845 0.3772 MNKKLLTTFMQDPVSPLIYNLHKQQVYGSKKKLSRSVSFPLPDSSSKEQGSWAIGNSSLQQGKGKLCLDNKTPKSVQFEPSKKFYVRSMSSGAKCFNVNEATMVRDVNCSSGSAQGQNQNEIKQFKNLKQKIEHVTGESRKEKLRVTMDAVIHKLPQGHGISDDLKKDFFKKLTDPNITREGEYYPESCNESDQYTTPSFTKHHRHNIRRIWSLQEPLEIYWQLYENSFNTQPNHLQSVNLKLRTEEARSPLRMLAPLQRMISLPGDLQSFSYVYQNWEFPDISSVTKPITASGDGTVSSANISYQKKKLDLNLCSKSQIQLDTPVENLIQKHLVGVGENDLVSSNIVEPGSHYRSKINDKVDMMKTDDFGHCCLKSGATSNDQYIVPIKEYKTATAASDSKSNPEPGGKLDNMVEQQEGIVDSLKSAQKVEIESKQLNYEIPPFDVDTRDKAEYNYVKYVLEICGLTGKDCISAWHSSDHPVDPLLYEEMEGDPDFCSYSYGRCNHHVLFDLINETLLELSGRCYCCCPMPLSQSHPMPKPKGCDTIHKVWTHMSKSFCMRSIAGLTIDDHVGRDLSRRDGWLNLHLFAQCVGLEVEDLIFHDLLQELTCDLA 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01326 614 PANTHER DUF4378 DOMAIN PROTEIN 148 614 - -
Cca01g01326 614 PANTHER PROTEIN TRM32 148 614 IPR044257 -
Cca01g01326 614 MobiDBLite consensus disorder prediction 38 57 - -
Cca01g01326 614 Pfam Domain of unknown function (DUF4378) 454 608 IPR025486 -
Cca01g01326 614 Coils Coil 118 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01326 Cca-Chr1 24959987 24965029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01326 435 602 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 41.530 1.49e-32 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01326 - - gmx:121174644 873.618