Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01322 ATGGGCCATGGCTTGACTGATGCTCTGTGTATGCCATACATTGAGCTCAGGAGCTGTTTCAAGGTTTTTCAAGAGTTTCAGAACCGAACCAAAGAATCGGACGTTCAAAAATATAAGATTCCAGATTTACAGCTTGTAGATCTTAAAGATTTGTTGGAGGACTTAAAGAGAAGTAGTGAGGAAATCCATCCATGTTGGAGGCAAATGGAACTATATGAAGACTCTCCAGGCAGTTCTGAGTACAGTACAGGATCAACTCTTCTGCCTCATTCAACTGGTGACTATTTGGAACACTCACTGCATCAAGATATTGGAACTGAACTGAATATACAAATTGGAGATCAAAAAAGAGTTGGGGGATGTGACCAAGGGGTTCTTTCTAGTGCAACTCTGGATCAAGGTTCGGAGGAGTTCAGTAGTATTGGTGGGGAGGGAATCTTTCGGCATCATTAA 453 0.4194 MGHGLTDALCMPYIELRSCFKVFQEFQNRTKESDVQKYKIPDLQLVDLKDLLEDLKRSSEEIHPCWRQMELYEDSPGSSEYSTGSTLLPHSTGDYLEHSLHQDIGTELNIQIGDQKRVGGCDQGVLSSATLDQGSEEFSSIGGEGIFRHH 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01322 150 PANTHER TRANSCRIPTION FACTOR MYB88 25 140 - -
Cca01g01322 150 PANTHER MYB PROTEIN-RELATED 25 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01322 Cca-Chr1 24790686 24793737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01322 16 108 MYB Transcription Factor Family AT1G14350 39.604 2.30e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01322 K09422 - gmx:100807667 180.259