Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01318 ATGCATTTTGGCATTGACTTTTCAATAATAGAGGCATTTAATATTAAGGTGGTGCGTGGTTTGATATTAGGAATAACATTGGCTGCCAAGTCCCGAGGAATTAAGATAAGCATTAAGGTGGTGCGTGGTTTGATATTAGGAATAACATTGGCTGCCAAGTCCCGAGGAATTAAGATAAGCATTAAGGGTTTGTTAAACAGGAGAATTGGTGCTACGAGTATCAATTCTGAAAGTTCACGTTCACATACTGTTTTTACTTGTGTGGTTGAATCTCGATGCAAGAGCCCTGCAGATGGTGTAAGCAGATTTAGAACAAGCAAAATAAATCTTGTTGATCTAGCTGGGTCAGAACGGCAAAAATTAACAGGTGCAGCAGGAGACCGTTTGAAGGAAGCTGGCAATATTAATAGATCACTTTCACAGCTTGGGTATGGTTTAAAATGTGTTTCTATACATTGA 459 0.3878 MHFGIDFSIIEAFNIKVVRGLILGITLAAKSRGIKISIKVVRGLILGITLAAKSRGIKISIKGLLNRRIGATSINSESSRSHTVFTCVVESRCKSPADGVSRFRTSKINLVDLAGSERQKLTGAAGDRLKEAGNINRSLSQLGYGLKCVSIH 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01318 152 PANTHER KINESIN-LIKE PROTEIN 58 143 - -
Cca01g01318 152 Pfam Kinesin motor domain 58 144 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g01318 152 ProSitePatterns Kinesin motor domain signature. 106 117 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca01g01318 152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 143 IPR027417 -
Cca01g01318 152 PANTHER KINESIN-RELATED 58 143 IPR027640 GO:0003777|GO:0007018
Cca01g01318 152 PRINTS Kinesin heavy chain signature 72 89 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g01318 152 PRINTS Kinesin heavy chain signature 107 125 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g01318 152 ProSiteProfiles Kinesin motor domain profile. 62 152 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g01318 152 Gene3D Kinesin motor domain 47 150 IPR036961 -
Cca01g01318 152 SMART kinesin_4 12 150 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01318 Cca-Chr1 24617989 24627183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01318 10 143 Calmodulin-binding Proteins AT5G65930 34.266 4.97e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01318 K10400 - gmx:100817614 159.844