Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01297 ATGCTGCATTCTGAGAAGGCATTGAGGAGGACTCTCATCCTTTCTGTCTTGGTCTCAACTGGTGTTTTTCCAGCTTTATCTTCTTATGGGAAGACAAAGAGTAAGAATCCGTATGATGAGAAACGTTTGCTACAACAAAATCAGCGGATACAAAAAGAAAACAATGCACCGGAGGACTTCCCAAATTTTATTAGAGAAGGTTTTCAAGTTAAAGTAGTGTCATCAGATAACTATGTAACGAGTGATTCAGGTCTCATATACCGAGATTTTGTAGTTGGTCAAGGTGATTGCCCAAAGGATGGTCAGCAGATCACTTTTCACTATGTTGGCTATAACGAATCTGGCCGTCGTATTGACAGCACTTATTTGCAGGGTTCTCCTGCCAAAATTCGCATGGGTAACAAGTCATTAGTTCCAGGATTTGAGGAAGGAATTAAAGACATGAGACCAGGTGGGAAGAGAAGAATCATTATTCCCCCTGAACTTGGACCACCAGTAGGACCCTCAACCTTTTTCAGCGCAAAACAGTTTGAAGTTTTTGATATTGAACTATTAAGCATACAAAACTGTGAAAGAAGGACCATAGCCTTTTACTCAGATGTGGTTTGCAATTGA 615 0.4049 MLHSEKALRRTLILSVLVSTGVFPALSSYGKTKSKNPYDEKRLLQQNQRIQKENNAPEDFPNFIREGFQVKVVSSDNYVTSDSGLIYRDFVVGQGDCPKDGQQITFHYVGYNESGRRIDSTYLQGSPAKIRMGNKSLVPGFEEGIKDMRPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDIELLSIQNCERRTIAFYSDVVCN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01297 204 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 101 188 IPR001179 GO:0003755
Cca01g01297 204 SUPERFAMILY FKBP-like 25 188 - -
Cca01g01297 204 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 98 185 IPR001179 GO:0003755
Cca01g01297 204 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 2 204 IPR044239 -
Cca01g01297 204 Gene3D - 33 196 IPR046357 GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01297 94 190 Calmodulin-binding Proteins AT5G48570 28.846 4.62e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01297 - - ccaj:109817556 414.075