Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01293 ATGGAATTACATTGGGTTTGGATGAGTGTTGCCACTTTGTTGGCTTCTTACGTTTTGCTAAACAAATTCGTGAGGAGGTTGAATGGATGGTATTATGATCTGAAATTAGGAAACAAACAATCCCTATTGCCTCCTGGTGATATGGGTTGGCCTCTTATTGGCAATATGATACCCTTCATCAAAGTCTTATCCTCTGGCCAACTCGATTCATTCATCAACAATTTTGTCTCCAAATATGGACGAAGTGGTATCTACAAGACACATTTGTTTGGAAAACCAAGCATGATTGTTTGTGCTCCTGAGATGTGTAGACAAGTGCTGAATGATGATGAGAACTTTAAATTGGCGTATCCAAAATCTGTTTCTGAATTACTTGGTAGTAATACCTCGACTGGAGTCTTTAATGTTGAACACAAGCGCTTACGACGAGTAGTTTCTGTTCCGATTATGGGTCAAAATATGTTAGCGATGTACTTGGCACGTATTGAGGAGATAGTAATTGATTCACTAGAAGAATTATCCAGCATAAAGCACCCTGTTGAGATTTTCAAGGAGTTGGAGAAGATTACCTTTAAAGTCATCACCTACGTCTTCTTTGGATCTCACAATCAACCCATCGTCGCAAAAGTAAAAGATTTATTTAGGGAATTTTCGGATTGTAATCCCTTATTTAGTGTGCCCATTAACTTGCCTGGTTTTACATATCATAAAGCACTTCAGGTACGCAAGAAGCTGTTAAAAGTGGTTATATCTGGTGTGGGTGAAAGGAGGTTGATGAGAAAAAAGGGTCAACTCAATGATGAAAAGGATTTTATTGATATTCTTTTGGAAGATAAAAGAGAGAATGGAGAGGAATTAGAAGATGAGCAGATTGCAGATATAGTCATAGGGCTTCTATTTGTTGGTCATGAAAGCACAGCAACTGGTTTGATGTGGTCACTTATGTATCTTACACTACATCCCGATGTGTTCAGAAAAGCCAAGCAAGAGCAAGAAGAAATAGTGAAGGCAAGACCGCCATCGCAGAAACATCTAAGTCATAGCGAAGTTAAGCAAATGGTTTATCTTTCACAAGTAATTAATGAAGTGTTACGTCTTACTAATATTTCCTTTGCAATTTTTCGAGAGGCAACTGCTGATGTCAATGTCAAAGGTTGTTATATCATACAGAAGGGATGGAAAGTTCTAGTTTGGTTAAGAGCTATTCATATGAATCCTGAATATTACCCAAATCCAAAAGAGTTTAATCCATCAAGATGGGATAATTACAATGCTACAGCAGGAACCTTCCTTCCCTTTGGAGGTGGAAGCAGGCTTTGTCCAGGAAAAGACATATCCAATCTCGAAACTACTATATTTTTACACTATTTTCTCCTTAATTACAGGTTGGAGATAATGAATTCAAAATCTCATGTTCCTAACTTCTCATTCTCTTATCCCAAAGATTTGGC 1451 0.377 MELHWVWMSVATLLASYVLLNKFVRRLNGWYYDLKLGNKQSLLPPGDMGWPLIGNMIPFIKVLSSGQLDSFINNFVSKYGRSGIYKTHLFGKPSMIVCAPEMCRQVLNDDENFKLAYPKSVSELLGSNTSTGVFNVEHKRLRRVVSVPIMGQNMLAMYLARIEEIVIDSLEELSSIKHPVEIFKELEKITFKVITYVFFGSHNQPIVAKVKDLFREFSDCNPLFSVPINLPGFTYHKALQVRKKLLKVVISGVGERRLMRKKGQLNDEKDFIDILLEDKRENGEELEDEQIADIVIGLLFVGHESTATGLMWSLMYLTLHPDVFRKAKQEQEEIVKARPPSQKHLSHSEVKQMVYLSQVINEVLRLTNISFAIFREATADVNVKGCYIIQKGWKVLVWLRAIHMNPEYYPNPKEFNPSRWDNYNATAGTFLPFGGGSRLCPGKDISNLETTIFLHYFLLNYRLEIMNSKSHVPNFSFSYPKDL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01293 483 SUPERFAMILY Cytochrome P450 43 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01293 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Cca01g01293 483 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01293 483 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01293 483 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01293 483 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01293 483 Pfam Cytochrome P450 44 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01293 483 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01293 483 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01293 483 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01293 483 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01293 483 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01293 483 PANTHER CYTOCHROME P450 88D6 22 469 - -
Cca01g01293 483 Gene3D Cytochrome P450 35 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01293 483 PANTHER CYTOCHROME P450 26 22 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01293 Cca-Chr1 23555755 23569338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01293 19 482 Cytochrome P450 AT2G32440 46.667 4.66e-152 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01293 K04123 K17875 ag:BAG68929 630.943