Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01278 ATGGGTGGGGGGCGCAACAAGGTCTTCACTTTGTCTGAGGTCTCTCAGCACAACAATGCCAAAGACTGTTGGCTTGTCATTCATGGCAAGGTTTATAATGTGACAAAGTTCTTGGAGGACCACCCAGGTGGGGATGAGGTCCTGTTGTCTTCCACAGGGAAAGATGCAACTAATGATTTTGAGGATATCGGTCACAGCACCAGTGCCGTAGCCATGATGGACGAGTACTATGTTGGAGACATTGATTCATCAACCATCCCCAGCAAGGTGAAGTACACTCCTCCAAAACAACCTCACTATAATCAGGACAAGACGCCGGAATTCGTCATTAGGCTCCTTCAGTTTCTAGTTCCCTTGTTCATCTTGGGTTTAGCAGTTGGTATTCGTTTCTACACTAAATCAACGTGA 408 0.4657 MGGGRNKVFTLSEVSQHNNAKDCWLVIHGKVYNVTKFLEDHPGGDEVLLSSTGKDATNDFEDIGHSTSAVAMMDEYYVGDIDSSTIPSKVKYTPPKQPHYNQDKTPEFVIRLLQFLVPLFILGLAVGIRFYTKST 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01278 135 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 6 82 IPR001199 -
Cca01g01278 135 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 37 44 IPR018506 GO:0020037
Cca01g01278 135 PANTHER CYTOCHROME B5 3 133 - -
Cca01g01278 135 Gene3D - 4 87 IPR036400 -
Cca01g01278 135 PANTHER - 3 133 - -
Cca01g01278 135 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 92 IPR036400 -
Cca01g01278 135 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 81 IPR001199 -
Cca01g01278 135 PRINTS Cytochrome B5 signature 31 41 IPR001199 -
Cca01g01278 135 PRINTS Cytochrome B5 signature 41 55 IPR001199 -
Cca01g01278 135 PRINTS Cytochrome B5 signature 56 63 IPR001199 -
Cca01g01278 135 PRINTS Cytochrome B5 signature 69 81 IPR001199 -
Cca01g01278 135 SMART Cyt_b5_2 9 82 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01278 Cca-Chr1 22919667 22922597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01278 3 134 NADPH P450 reductases AT5G48810 70.896 1.18e-70 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01278 K23490 - gmx:100500611 271.937