Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01253 ATGGAATTACATTGGGTTTGGATGAGCGTTGCTACTTTGTTGGCTTCTTACGTTTTGGTAAACAAATTTGTGAGGAGGTTGAATGGGTGGTATTATGATCTGAAAGTAGGAAACAAAAAAACCCTATTGCCCCCTGGTGATATGGGATGGCCTCTTATTGGCAATATAATACCCTTCATCAAAGACTTATCCTCAGGCCAACTTGATTCATTCATCAACAAATTAGTGTCCAAATATGGACGAAGTGGTATCTACAAGACACATTTGTTTGGAAAACCAAGCATGATTGTTTGTACTCCTGAGATGTGTAGGCGAGTACTGAGTGATGATGAGAACTTTAAAGTGGCGTATCCAAAATCCATTTCTGAATTATTTGGAAGTAAGGCCTTCACTGAAGTCTCTAGTGCTGAACACAAGCGTATACGACGTGTAATTTCTGCTCCCATTTTGGGTCACAATATGTTAGCACTGTACTTAGCACGTATTGAAGAGATAGTGGTTGATTCATTAGAAGAATTATCTAGCATGAAGCACCCTGTTGAGGTTTTCACGGAGTTGGAGAAGATTCCCTTCAAAGTCATCACCCACGTCTTCTTGGGATCTCACAATCAACCCATCGTTGCAAAAATAAAAGGTTTATTTAGGGAATTTTCAGATTGTAATCCCTTATTTTCTATCGGCGTTAACTTGCCTGGTTTTACATACCATAGAGCACTCCAGGTACGCAAGAAGCTGTTCGAACTAGTTATATCTATTGTGGGTGAAAGGAGGTTGATGACAAAAAATGGTCAACTCGAGGATAAAAAAGATCTTATTGATATTCTTTTGGAACATGAAAGAGAGAATGGGGACAAATTAAAGGATGAAGATATTGCTGATGTATTCATAGGGCTTATATTTGCTGGTCATGAAAGCACAGCAACTGGTTTGATGTGGTCACTTATGTATCTTACACAGCATCCCGAAGTGTTCAAAAAAGCAAAGAAAGAGCAAGAAGAAATCGTGAAAGCAAGACCGTCATCGCAGAAACATCTAAGTCATAGCGAAGTTAAACAAATGGTTTATCTTTCACAAGTAATTAATGAAGCGTTGCGACTTACTAATATCGCATTTTCAGTTTTTCGAGAGGCAACTACCGACGTCAATATTAATGGTTATATCATACCGAAGGGATGGAAAGTTCTAGTTTGGTCAAGAGCTATTCATATGAATCCTGAATATTACCCAAATCCAAAAGAATTTAATCCATCAAGATGGGATGATTACAATGCTAAAGCGGGAACCTTCCTTCCCTTTGGAGCAGGAAGCAGGCTTTGTCCTGGAAAAGACATATCCAATCTCCAAACTTCTGTATTTCTACATTATTTTCTCCTTAATTACAGGTTGGAGAGAATGAATCCAGAATATCGTGTTCCCAACTTCTCATACTCTTATCCCAAGGACTTGGCTAAGTTTATCAAGATCTCTGCTTAA 1473 0.3849 MELHWVWMSVATLLASYVLVNKFVRRLNGWYYDLKVGNKKTLLPPGDMGWPLIGNIIPFIKDLSSGQLDSFINKLVSKYGRSGIYKTHLFGKPSMIVCTPEMCRRVLSDDENFKVAYPKSISELFGSKAFTEVSSAEHKRIRRVISAPILGHNMLALYLARIEEIVVDSLEELSSMKHPVEVFTELEKIPFKVITHVFLGSHNQPIVAKIKGLFREFSDCNPLFSIGVNLPGFTYHRALQVRKKLFELVISIVGERRLMTKNGQLEDKKDLIDILLEHERENGDKLKDEDIADVFIGLIFAGHESTATGLMWSLMYLTQHPEVFKKAKKEQEEIVKARPSSQKHLSHSEVKQMVYLSQVINEALRLTNIAFSVFREATTDVNINGYIIPKGWKVLVWSRAIHMNPEYYPNPKEFNPSRWDDYNAKAGTFLPFGAGSRLCPGKDISNLQTSVFLHYFLLNYRLERMNPEYRVPNFSYSYPKDLAKFIKISA 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01253 490 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01253 490 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01253 490 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01253 490 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01253 490 Pfam Cytochrome P450 44 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01253 490 PANTHER CYTOCHROME P450 26 22 468 - -
Cca01g01253 490 Gene3D Cytochrome P450 35 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01253 490 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01253 490 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01253 490 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01253 490 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01253 490 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01253 490 SUPERFAMILY Cytochrome P450 41 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01253 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Cca01g01253 490 PANTHER CYTOCHROME P450 88D6 22 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01253 Cca-Chr1 21730810 21735283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01253 24 481 Cytochrome P450 AT2G32440 47.930 1.36e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01253 K04123 K17875 ag:BAG68929 672.93