Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g01245 | ATGGAAGTTGACCAGAATGAAGAAATTAATGGCAACAAGGATCATAAGCGTAAATGGGAAATGGGAGAGGTTGGAGAAGGAAACGATAGCTTGAAACTTTCATTGGCAAGGCATGTAAAGGATACAAGTAGTGATGAAGAAATTGGACTTGTCTCACTTTCTCTTGGAATTTCATCCACAAGCCAACATGAGATGAAAAATAGCAATATTAATAGAAGTGCAAAGATCAGACAAATTGAGGGTTTGAAAGAAGGACCTGCATTAGGATTAGATATCAGAGTTGACCCTTCAGCAGTAAAAAGTCCAAGCACTGAAAGTAGCTGTTATGGGGAAAGGAAGGAAGAGGAACTTAGAGAGATATGGCCACCCAATAAAGTTCTCAAGACAATAATAACTGGGGATAAAAGTGAAACTTCTCAACATGCTCTACTCAAGAAGGCTAGGGTTTGTATTAGAGCCAAATGTGATACCCTTACGATGAATGATGGATGCCAGTGGAGAAAATATGGACAGAAAATGGCGAAAGGAAATCCGTGTCCCAGAGCATACTATCGATGCACCTTCACTCCATCTTGTCCAGTGAGAAAACAGGTTCAAAGATGTGCCGAAGACATGTCAATCTTGATTACTACCTATGAAGGAACCCACAACCACCCTCTTCCTACTTCAGCCACAGCCATAGCCCACACAACTTCTGCAGCTGCTTCCATGCTTCAGTGTCACTCGCAATTAGGACTAGTCAATTCAGATTCAGTCCCCCTCATCAATTCTAGTGTTCCTTATAACCTCAATGCACTAAACTTCACAACATCAAGCTATCAACACTTTTCAAGATCACAACAATTATATTTCCCCCACTCACCATACATTTCAACCTCTAATTCTCACCCCACCATCACTTTTGATCTCACCACTCCTCAAACTTCACCTCATACACCCTTCTCTTTCATACCAAAATATTCATCAACACATCTTAATTCTTCCTCAAGTACTTTCTCTCCTTTGGAATCTAATATACCACAGTCACCTTATTTGAGTCCTTATAGTGGTTACTTCAATTATGAGGGATTGATCTCACAACATAAGAAACAACATGGTTCCATTATGAACACTGGAAAACAACCATTTCAAGAGCATATCTGTCAACCTAATTACATTATTAATCAACAACCTTTACCTGATTCTATTGTAGCTGCAACCAAGGCAATCAAGTCTACCCCAAAATTTCAATCTACTTTAGCAACTGCTCTCACAGCGTATGTTGGTAATGGGGTAAGAGGAAATCATGTTGGGGCCCAGAGTACACTTTTGGACTTAAACCTTGGTGGAGATACGTTTTACTCAACGAACACAGTTTACACTTCTAATGCATCAAGGTACAGGAGAATATCATCTTCTACTCCTAATGCTCCAAAAGGAAACTCGGTCATTTTTCAACCATCACAAGCATCTGAAAGTTCCTTTGGATTGTCGTCTAATAAAGTAAACCATTCTTAG | 1497 | 0.3968 | MEVDQNEEINGNKDHKRKWEMGEVGEGNDSLKLSLARHVKDTSSDEEIGLVSLSLGISSTSQHEMKNSNINRSAKIRQIEGLKEGPALGLDIRVDPSAVKSPSTESSCYGERKEEELREIWPPNKVLKTIITGDKSETSQHALLKKARVCIRAKCDTLTMNDGCQWRKYGQKMAKGNPCPRAYYRCTFTPSCPVRKQVQRCAEDMSILITTYEGTHNHPLPTSATAIAHTTSAAASMLQCHSQLGLVNSDSVPLINSSVPYNLNALNFTTSSYQHFSRSQQLYFPHSPYISTSNSHPTITFDLTTPQTSPHTPFSFIPKYSSTHLNSSSSTFSPLESNIPQSPYLSPYSGYFNYEGLISQHKKQHGSIMNTGKQPFQEHICQPNYIINQQPLPDSIVAATKAIKSTPKFQSTLATALTAYVGNGVRGNHVGAQSTLLDLNLGGDTFYSTNTVYTSNASRYRRISSSTPNAPKGNSVIFQPSQASESSFGLSSNKVNHS | 498 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g01245 | 498 | Pfam | WRKY DNA -binding domain | 161 | 219 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca01g01245 | 498 | Gene3D | WRKY domain | 145 | 222 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca01g01245 | 498 | PANTHER | WRKY TRANSCRIPTION FACTOR 72B | 1 | 486 | - | - | |
Cca01g01245 | 498 | SMART | WRKY_cls | 160 | 220 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca01g01245 | 498 | MobiDBLite | consensus disorder prediction | 464 | 498 | - | - | |
Cca01g01245 | 498 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Cca01g01245 | 498 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 1 | 486 | IPR044810 | GO:0003700 | |
Cca01g01245 | 498 | ProSiteProfiles | WRKY domain profile. | 155 | 221 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca01g01245 | 498 | SUPERFAMILY | WRKY DNA-binding domain | 154 | 221 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g01245 | Cca-Chr1 | 21105426 | 21112957 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g01245 | 24 | 429 | WRKY Transcription Factor Family | AT1G18860 | 36.761 | 1.48e-58 | 200 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Cca01g01245 | WRKY | 2.1e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g01245 | - | - | ccaj:109812486 | 987.638 |