Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01243 ATGAAGAACTTGTGGGTTTATTTCAGTTACTTGTTTCCTGCAATCATTCTTGTTCTGCTTACTCCTTCCTCAGTTGCACAGATAACAACAAGTGAGAATAGAATTCTTTTCCAAGTTCAGAAGCTTCTTGAATATCCTCAAGTTCTTCAAGGGTGGAATAGATGGACCAACTTGTGTTTCCTCCCTCCTTCACCTTCCCTCAAGATAGTTTGCACAAATGGTCATGTGACAGAACTAACAATCATTGGAAACAAGTCCTCCCCATCTTCACACACCCACAAAGCAGCTTCTTGGACTTCCCTTCAAACTCTATCAGGAAGATTCTCCATTGACTCTCTCTTCAAAGCCATGACAAAACTTTCAAATTTGAAGGTGTTGTCCTTGGTGTCCTTGGGTTTGTGGGGTCCTTTACCAGCCAAGATCAACAGGTTTTGGTCTTTGGAAGTGCTAAACATTAGCTCAAATTTCATTTATGGGGAAATTCCACAATCCATAACCTCTATGAGAAATCTAAGGAGTCTAGTTTTGGTTGATAATCTCTTTAATGGAACTGTTCCTGATCTCCAAAGGCTAGCTTCTCTTGAAGAGCTCAACTTGGGAGGTAACAAACTGGGTCCTCAATTCCCTTCAGTGGGAAAGAATCTTGTCACTATTATCTTGAGAAATAATTCCATAAGATCTCATATTCCTCCACAATTAGTTCACTTTGACAAACTTGAGGTATTTGATGTCTCTTCCAATGAATTTTTTGGAAACATCCCATCCTCTCTGATCTCTAAGCCTTCCCTTCAGTACCTAAACTTGGCTGCAAACCATCTAAGTGGTAACCTCTTAGTGAATACAGCGTGTGGTTCTTCTCTAAAGTTTGTGGATATCTCACACAATCTTCTAGTAGGAGAATTGCCTTCATGCTTTGGTTCAATGTCTTCAAAGGCCACAGTACTATATTCTGGGAACTGTTTGTCCACCAAAAAGCTAAATGATCAACAACATCCATATTCTTATTGCAAGAAAGAGGGAGCTTTAGCTGTTAAGCCTCCAGGTAAAAAGCTTAAGAAGGAATCGGATTCGGGTACAAAAGTAGGCCTAGTACTTGGAATAATCGGAGGAATTGTAGTAATTGGAGGACTTCTGGTTGTACTCATTGTGTTCATCTTTAGGAAGTCCAAAGCAGAAAGATTAGATCATAAAATGGACAAATTTGTGGCTAGTAAATATTCTGCCCGTGCATCTCCTAGACCAAACAATGGTACAAGACATATTCCTCAGGCAATGAAGCAAGCTACACTTGGACTGCCACCATATCGTAATTTCACATCAGAGGAAATTGAAGATGCAACTAACAACTTTGACCCATCAAATTTAATAGAAGAGGGATCACAGGGACAGTTATATAAAGGTTGGCTCAGAGATGGTTCAGTGGTCCTGGTTAAATGTGTAAAAATAAAGCAGAAAGGTTTGCCCCACAGCATCATGCAGCACATAGAGGTATTACCCAACTTGAGGCACAGGCATATGGTGAGTGTTCTAGGACACTGTATCACTACTGAACAGGATCATCCCCAAACTACAAGCACAGTCTTCATTGTATTTGAGCACATCTCAAATGTGTCATTGAGGGATCAACTTGCAGATGGGAGAAAGAGGGAAATGTTGAAATGGCCACAAAGAATGGCAATCAGTATAGGCATTGCAAGAGGAGTCCAGTTTTTACACACAGGAGTTGCTCCTGGCATATTTGGCAACAATTTAAAGATGGAGAACATTCTGTTGGATGATAGTCTCAATGCAAAAGTCAGTAGATACAACATTCCATTGTCATCCAAGGTTTGTACAGACTACATAATTTGA 1851 0.4014 MKNLWVYFSYLFPAIILVLLTPSSVAQITTSENRILFQVQKLLEYPQVLQGWNRWTNLCFLPPSPSLKIVCTNGHVTELTIIGNKSSPSSHTHKAASWTSLQTLSGRFSIDSLFKAMTKLSNLKVLSLVSLGLWGPLPAKINRFWSLEVLNISSNFIYGEIPQSITSMRNLRSLVLVDNLFNGTVPDLQRLASLEELNLGGNKLGPQFPSVGKNLVTIILRNNSIRSHIPPQLVHFDKLEVFDVSSNEFFGNIPSSLISKPSLQYLNLAANHLSGNLLVNTACGSSLKFVDISHNLLVGELPSCFGSMSSKATVLYSGNCLSTKKLNDQQHPYSYCKKEGALAVKPPGKKLKKESDSGTKVGLVLGIIGGIVVIGGLLVVLIVFIFRKSKAERLDHKMDKFVASKYSARASPRPNNGTRHIPQAMKQATLGLPPYRNFTSEEIEDATNNFDPSNLIEEGSQGQLYKGWLRDGSVVLVKCVKIKQKGLPHSIMQHIEVLPNLRHRHMVSVLGHCITTEQDHPQTTSTVFIVFEHISNVSLRDQLADGRKREMLKWPQRMAISIGIARGVQFLHTGVAPGIFGNNLKMENILLDDSLNAKVSRYNIPLSSKVCTDYII 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01243 616 Gene3D Phosphorylase Kinase; domain 1 415 520 - -
Cca01g01243 616 Gene3D Transferase(Phosphotransferase) domain 1 534 609 - -
Cca01g01243 616 ProSiteProfiles Protein kinase domain profile. 450 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g01243 616 PANTHER OS07G0166700 PROTEIN 6 610 IPR045272 GO:0004714|GO:0006468
Cca01g01243 616 Gene3D Ribonuclease Inhibitor 29 212 IPR032675 -
Cca01g01243 616 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 6 610 - -
Cca01g01243 616 Gene3D Ribonuclease Inhibitor 213 339 IPR032675 -
Cca01g01243 616 SUPERFAMILY Protein kinase-like (PK-like) 431 600 IPR011009 -
Cca01g01243 616 SUPERFAMILY L domain-like 32 322 - -
Cca01g01243 616 Pfam Protein tyrosine and serine/threonine kinase 455 601 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01243 Cca-Chr1 21080779 21084867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01243 24 610 Miscellaneous Gene Families AT2G02780 49.589 1.47e-173 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Cca01g01243 PK_Tyr_Ser-Thr 2.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01243 - - gmx:100803061 991.875