Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01238 ATGTTCTCTGTTCTCCTCTATGCGGCTGCCAAACCCCATTCTCCTAAATCCTTGCTCGCGTTCTCCACATGCCTGATGAGAGAGGAGGCAAAGCTGGAGAGGGAAGTCATTAAGATCATCCTCAGCAATAACGACGACGGTGAGTCCCTCCTTAAACCTATTTTGGGCAATGCTGTGTCAAATAGCAACCACCGCATCTGCAAGGGGTTTAAGATTGGGGCAAAGAGGAAAAAGGCTGAAGATAGTACTTTGTTTGCTTCCAAATCGGCTCAGGATATTACTCTTGCTGACCTAGCCCCCACCCACTTGATTAGGCTTAGGCTTGCTCTCAACTTTTTTGTGTTTTATTATGAAATCCTTAACTCACCAGATTGTGCCTGTAATCCTTCCAAACAGCCACATTATGATGGAGTTTTTCTAGATAAACACCCTCTTGGAAAGTCTAATGAGCTGCGATATTTTCCTGCTGCTATTGTGGCTGCGGTTCTTGAGATCATAGTTCACATGCCAGCTATATCAACTATTGCCATATGCAAAGGCCTAGAAAACTGA 552 0.4457 MFSVLLYAAAKPHSPKSLLAFSTCLMREEAKLEREVIKIILSNNDDGESLLKPILGNAVSNSNHRICKGFKIGAKRKKAEDSTLFASKSAQDITLADLAPTHLIRLRLALNFFVFYYEILNSPDCACNPSKQPHYDGVFLDKHPLGKSNELRYFPAAIVAAVLEIIVHMPAISTIAICKGLEN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01238 183 PANTHER 14-3-3 PROTEIN 62 137 IPR000308 -
Cca01g01238 183 SUPERFAMILY 14-3-3 protein 34 134 IPR036815 -
Cca01g01238 183 Pfam 14-3-3 protein 65 132 IPR023410 -
Cca01g01238 183 Gene3D - 58 165 IPR036815 -
Cca01g01238 183 PRINTS 14-3-3 protein zeta signature 113 139 IPR000308 -
Cca01g01238 183 PRINTS 14-3-3 protein zeta signature 86 112 IPR000308 -
Cca01g01238 183 PANTHER 14-3-3-LIKE PROTEIN GF14-F 62 137 - -
Cca01g01238 183 SMART 1433_4 1 168 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01238 Cca-Chr1 20894203 20895538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01238 64 149 14-3-3 family AT3G02520 61.628 4.10e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01238 K06630 - oeu:111391676 100.138