Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01235 ATGTCCAAAGGGAGCTTAGAGAATCATTTGTTTAGAAGAGGACCACAACCTCTCTCTTGGGCAGTGAGGATGAAAGTGGCCATAGGTGCTGCCAGAGGACTCTGTTTCCTTCATAATGCCAAATCACAAGTCATATACCGTGATTTTAAAGCATCTAATATCCTCCTGGACGCAGATTTCAATGCTAAACTATCTGATTTTGGCTTAGCAAAGGCTGGCCCTACGGGTGATAAAACTCATGTCTCTACTGAAGTCATGGGTACTCAAGGATATGCAGCACCTGAATATGTTGCAACAGGTCGTTTGACAGCTAAAAGTGATGTATATAGCTTTGGGGTTGTTTTGCTTGAACTATTGTCTGGTAGACGTGCTGTTGACAGAACCAAAGCTGGTGTAGAGCAGAATCTGGTAGAGTGGACAAAACCATATTTGGGTGACAAAAGAAGACTATTTCGGATTATGGACACCAAGTTGGGAGGCCAATACCCACAAAAAGGAGCATACATGGCTGCTACACTTGCTCTAAAGTGCCTTAATCGGGAAGCCAAGGCAAGGCCTCCAATGACAGAGGTTTTAGAAACTCTTGAAAAGATTGAGGTCTCAAAAACTGCAGGGAGAACCTCCCAATTATTAGAACACAAGAGAGTCCATGCTCCTGCCAGAAAGTCAACTGTGCGAAATGGTCCCCTTTGA 693 0.4401 MSKGSLENHLFRRGPQPLSWAVRMKVAIGAARGLCFLHNAKSQVIYRDFKASNILLDADFNAKLSDFGLAKAGPTGDKTHVSTEVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRTKAGVEQNLVEWTKPYLGDKRRLFRIMDTKLGGQYPQKGAYMAATLALKCLNREAKARPPMTEVLETLEKIEVSKTAGRTSQLLEHKRVHAPARKSTVRNGPL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01235 230 ProSiteProfiles Protein kinase domain profile. 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g01235 230 PIRSF ILK 1 213 - -
Cca01g01235 230 Pfam Protein kinase domain 2 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g01235 230 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
Cca01g01235 230 Gene3D Transferase(Phosphotransferase) domain 1 1 220 - -
Cca01g01235 230 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL2-RELATED 1 227 - -
Cca01g01235 230 PANTHER OS01G0588500 PROTEIN-RELATED 1 227 - -
Cca01g01235 230 SUPERFAMILY Protein kinase-like (PK-like) 1 197 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01235 Cca-Chr1 20873893 20878421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01235 1 195 Glycoside Hydrolase AT3G07070 56.061 2.12e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Cca01g01235 Pkinase 1.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01235 - - gmx:100305401 413.305