Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g01197 | ATGGGTACCAGAAACGTGTTTATGCTTAAGACACACATTGATTCAATCAATTTGTCTTCTGCTAATGGTTTTGTTTATGAAAACGTGATTTGGGCCTTGGCTTCTCTTTGGGTTTTTTTCTGCAACTATGTGTTGTATTCCTTGGGGTTGGTACTCAAATACATCTTCAGATTTCGTGTGGAAGATAGAAAAAGGGAGCACCTTGTTCCACATGACTTGTTTGATCATACCAAGAGAAATCATGTTGAAGATTCTAAGGTTGATGGGTTGGCAGAAGAGTTGGCCAATTTGCTATTTCCCATCTTTGAGAATTTTCATGTAGCAATTGAAGAGAGAGGAGAATCAGAGTGCCCTGTTTTATGGGGGATAGACTCTGATATACATAGTCATCAAGATGCTAAGAAATTAGAAGCAGAAACAGAGTTCTCTGTTTTAAAGGAGAAAGCCAATTATATGCACGAAGGTGCTAAGAAAATAGATGGAGAAACAGAGCACTCTGATTTAAAGGAGAAAGACTATGTTATACATGAAGATGGTAAGAGAATAGAAGGAGAAAGAGAGGAGTCTGTTTCCATGGAGACTGTTTCATGTGTTCATGAAGATTTTAATAAAATGGACCAAAATGAAAAAGATAGCTCTGTTTCCATGGAGGATGATTCCAATTTTCCAAAAGTTAATAGGAAGAATGTTGAAGAAGAACAAATAGAAGAGCCTTTTTGCACAGTACCAGATACTATCTCTGCTGAAGCCAGTGATTTGGTAGAAGAAGAAGAACCAAGGATCATGACCTTTACTTTCCAACGAAATTATACAGCTGTAAATGTTTCTGATAACATAATTTCCAGCACTAAAAATAATGCCAAAATTGAATTTTCAGAGAACAATTTGAAGAAAGGCCTTGTTGCTCAAGAAGAGAAAGAGCACTCTGTTCAAGAACAGAGGAACATCTCATCCAATTCCAATTCTGGTCAAATCCTTCAAATTAATGCGTTTGGTGGAAGTGATTCATCAGATGATGATGCTCTAAATGATAACACACAACAATCTGATTTTGGGTCAGAATCATGCTCCAGCAAAATTGATGATTTGGTAGCACATCAAATTCTGAGTAACAACCATTCCCGTGAAGAATTTGATTCTAAAAGCCTTAAGGGGATTAAGGAGGAAAGAGTTAAAGATAGAGAGGAAACTCAACTTTCATGTGATAGTGAAGCCTCACACAGTCCCAATTTTCATCTTCATTTGGAAGAAGCAAATAGGGGTAGCATGGAGAAAACTAAAGAATTCATGTGGGAAGATAACTCGGATGAATCAGATTTTGATGAAgaagaggaagaggaagaggaagaggatgaggaagaggaTGATGATGATTGGGAGCATGATGAGGTAGTGCAACAATTGAGATTGGAACTTAAAAATGCAAGACAAGGAGGACTTGCCACTATTTTAGAAGAGGAAGAAGATGAGGAAATTGAGTCTCCAAAAGTTGTTGAGGATCTTATGCCACTGAAGATCGAAGAGAAGGTACAATTCAAGGATCACATTATTGAAATTCAAAAGGTTTATAGGTGCTACGCAGAGAAAATTCGGAAACTGGATATTATTAATTACCAGACCATGCATGCAATAGGGCTTCTTCAACTACAAGACCCTCTAAAATTAATGTTAATTCCAAAATCAACCGTCCAAAGTGCGAAGCCTCTATTATCTCAGAATTTGTGGCCACGCAAAGCACTAAAGCAGATATCTGATCCAATTGTGAAGTTTATTGAAGAACTGCATGGGGATTTGGAATTGGTGTACGTTGGACAGGTTTGCCTCTCGTGGGAAATCCTGTGTTGGCAGCACAACAAAGTTGAAGAGTTGAAACAATATGATTCACAATGGCCTCGTAGCTATAATATTGTGGCCGGTGAGTTTCAACTTTTTCAAGTCCTCATGCAACGGTTTTTGGAGGATGAACCCTTTCAAGGCCCCAGGATTCAGAATTACGTCAAGAACCGCTGTCTTATTCGCAAATTGCTTCAAGTTCCACCTATTAAAGATGATAATACGAAGGACAAGAAAATAATTAAGTTGGGTGAAGAGTATGCAATTGATGGTGAAAGGTTGGCACATATAATGAAGGAGTCCATGCGGGTGTTCTGGGAATTTGTCAGAGCAGATAAAGATTATGGGAATGCAAACTCTAAAGTCTTGCATCAAACTGGAATTGATGTGAAGGACCCAGCAATTTCAGATCTTCTTGGGAATGTTAGAACCCAATTACACAAGAAGGAGAGAAAGCTGAAGGACATAGTGAGGAGTGGGAATTGCATAGTGAGGAAGTTCCAAAAGCACCATGAGGAACAAATTCAACTTGATCAAGAACAGTTGCTTGCTCAAGTGGGATTAAGATTGGTCTCAAGGGTGTTACACATGAAAAATTTGAGAAAAGATCGGGCAAAAGGAACTCGCCATGAGATTCAACTTTGTAAACTATTAAGCATCGCTGAAGCACTCTGGACGCAGGCATTTATGATGAAGCAGCGACTGTGTTACTCTTCTTCCACCTGTGAATGGACTTATGATGTGTTCCTCAGTTTTAGAGGCGAAGATACTCGAAGTGGCTTCACTGGAAACCTTTATAGATCTCTTTGTGACAGGGGAATCCACACATTCATAGATGATGTGGAGCTTAGCAGAGGGGAAATGATTACACCAGCCCTTTTCAAGGCAATTGAGCAGTCTAGAATTGCCATTGTTGTTTTCTCTGAAAATTATGCTTCCTCGGCTTATTGTCTTGAAGAACTTGTTATAATTCTTGAGTGCATAATGAAAAAGGGTCGATTGGTTTGGCCAGTTTTTTATGGAGTGAGTCCTTCTTATGTGCGGAATCAGGAAGGTTCTTATGGGGAAGCATTGGCTAAGCTTGGAGAAAGATTCAAGAATGACGAGGAGAGGCTGCGGAAATGGAAGCTAGCTCTAAAAGAAGCGGCTAATTTGTCTGGTTTTCATTTCATGTTCAAACATGGGTACGAATATAAATTTATTCAGACAATTGTTGAAGAGGTGTCAAGAAAGATAAATCGTAGCCCTTTACATGTGGCTAATTATCCAATTGGATTGGAATCTAGAGTGCAAGAGGTGAAGTCACTTTTGGATGTGGGATCTAATCAAGGAGTAAGCATGGTTGGAATTTATGGAATCGGGGGAATAGGTAAAACCACAATCACATGTGCATTGTATAATTGCATTGCTGATCAATTTGAAGGTCAGTGTTTTCTTGCTGATATTAGAGAAAATTCAATGAAGTATGGTTTAGTACAACTTCAGGAGACAATACTTTCTGAAATGGTTGGGGAGAAGAGTATCAAGTTGGGCAGTATTAATAGGGGAATGGCAGTATTGAAAAGCAAGCTTCAACGGAAGAAAGTTCTTTTGATCCTTGATGATGTTGATAAAATGGAGCAATTTAATGCACTTGCTGGTGATCTTTCTTGGTTTGGTTATGGCAGCAAAATCATTGTCACGACAAGGAATAAACATTTGCTACACGTACGTGGTGTTGAAAGAACATATGAGGCAAAAGGATTAGATCATAAAGAAGCTCTTGAGCTGTTTAGTTGGCATGCTTTTAAAAGCAATGAGGTTGGTCCAAGTTACATGGATGTCTCTAAGCGGGCAATACTTTATTCCAATGGCCTTCCTTTGGCTTTGGAAATAATAGGTTCTAACTTATGTGGTAAAACAATGTCTGAATGGATAGCAGCATTAGATACTTATGAAAGAATTCCAGATGAAGATATTCAGGAAAAACTTAAAGTAAGCTATGATGGTTTGAAGAGAAATGAGAAAGAAGTTTTCCTTGACATAGCTTGTTTCTTTAGAGGTTACATTTTGAAAGATGTCATAAGTTTATTGCTCCAAGGTCGTGGTTTCTCACCAGAGTATGTTATTCGAGTGTTGATTGATAGATCTCTCATAAAGATCGATCAATGTGGTTTTGTGAGAATGCATAACTTGGTAGAGGACATGGGCAGAGAAATTGTTCGGCAGGAATCACCATCAGAACCTGGGAAACGCAGTAGATTATGGCTTTATGAAGATATTGTTGATGTCTTGGAAAATGACAAGGGAACCGAAACAATTGAAGTAATCATGCTACATTTGCCAAAGAGTAAGGATGTTCGATGGAATGGAAGTGAGCTCAAGAAGATGACAAACCTAAAGATACTAACTATTGAAAATGCTTACTTTTCTAGAGGCCCTGAACATCTCCCAAATAGTTTGAGAGTACTAAAATGGTGGGGATATCCTTCACAGTCTCTGCCACCTGAATTTGATCCAAAGAGACTTGTTATGGTAGATTTGTCTATGAGTTGCAATTTCTTGGGCAAACAACTCGAACACATGAAGTTCGAGTCTTTGAGTGAAATGGTTTTAAGAGGTTGCAGATTCATGAAAAAGGTACCTGACATGTCTGGAGCCCAAAATTTAATGAAGCTTTGTCTTGATCATTGTAAGAATTTAGTAGAGGTTCATGATTCCGTTGGGCTTCTTGATAAACTTACACGGTTCACTGCTATTGGATGCACCAATCTAAGGTTTCTTCCTCACAACTTCAAGCTAACATCACTTGAACATCTGTCTCTCAGAAAATGCTCAAGCCTCCACTATTTGCCAAATATATTAGAAGACATGGAACATATAAAAAATCTTGATCTGTGTGGTACTGCTATCGAAGAATTACCATTTTCGTTTAGGAAACTCACTGGACTTAAATATTTAGTGCTGGACAAGTGCAAGAAGCTTTATCAGATCCCAATAAGTATTTTGATGTTACCAAAACTTGAGAGATTGACAGCTGTAAAATGTGGACGGCATGTAAATTTAATCCTTGGTAAAAATGAATTGGCTTCATCCAAGCCTTTGATGAAAGATGTTAGATTAAGCTACAATGATTTGACACCTGTCAGCCACTCCAATGTTGAATTCTTAGACCTAACTGCCAGTGCGTTCAAAGTCCTTCCTGAATGCATTAGCCAGTGTCGCTTTCTAAAGTATCTAGTTATGGACAATTGCAAGAAGCTTCAAGAAATCAGAGGGGTTCCTCCAAAGATAAAATATCTCTCGGCAATAAACTGTACATCACTGAATCACATGTCTCAAAGCATGTTATTGAATCAGAGATTACATGAGGGTGGGGGCACAGATTTTTCCCTTCCAGGAACAAGGATACCAGAATGGTTCGACCATTGTGTTGTGGGACCATCCCTGTCTTTCTGGTTTCGTCACAAATTTCCAAAGATGGCTCTAGCTGTTGTTGGAGTTTTGGACCAACAGGGCAGTTTTCCCACTTCAAGATTCCACTTGGTCATCAATTCTATTCAAAAGCTGCATTGCAATTTCACTGTGCAATCAAAACTAATCACATATCATATATTTTTGTCCGATGTACAACTCAAATCCTACAATGGTGAATTGGAAAGTGTGTATGGGGATGATGGGTGGAATCATGTTGAGATTTCATACGTAGGACCAATGGTCTTTCCACATTCATGCAAATCCAAGAAAGGAATCATTAAATGGATGGGGGTTCATGTCTACAAGAAAAAAACAACCGTGGAGGATGTCCGGTTCACAAATCCTAGGTCTCCAAAGAGAGCATATAGTGAAGTTTCCAAGTCTGGTTTGAATGGAAATTTTCAACCGTTGCCCAAAAGGAGCCGTTTATCACAAGGTATGGGAATTTGGGAGGCATCACATATGAAGCAGCATGAAGGTAATAGTGGTTATCATGGTGTATCACAGAGACTATGGTCGGCAATTTGCAGCATTGCTGCTCCTCTACATGTTAAAGTCCTAATGTGGAATAGTTGCCAAGATGCTTTGCCAACTTGTGAATATCTTTTCAGGAGGAAGCTTGTAGATAGCCCCCTCTGTCCCATTTGTGGAACTGTACCTGAAACCATTGAACATGTGTTCCTGTTTTGTCCATGGACACAACCCCTTTGGTTTGGAAGTGATTTCCAGTGGTGCATTGATGTCAATACAGTTCAAAGCTTTCAACTTTGGCTTTGCCAGAAACTCGTAGAGATTAATAGGGTATATCTCGAAAATGCCAGCCAAGCATTTGCTCTAGTGGGAAGTATTTGTTGGGCAATTTGGAAGGGAAGGAATGAATTTGTCCATGAAGGCAAACCTGTTAATCCGTTGATTTTAAGGAAGGAGAAATTTTAA | 6225 | 0.3867 | MGTRNVFMLKTHIDSINLSSANGFVYENVIWALASLWVFFCNYVLYSLGLVLKYIFRFRVEDRKREHLVPHDLFDHTKRNHVEDSKVDGLAEELANLLFPIFENFHVAIEERGESECPVLWGIDSDIHSHQDAKKLEAETEFSVLKEKANYMHEGAKKIDGETEHSDLKEKDYVIHEDGKRIEGEREESVSMETVSCVHEDFNKMDQNEKDSSVSMEDDSNFPKVNRKNVEEEQIEEPFCTVPDTISAEASDLVEEEEPRIMTFTFQRNYTAVNVSDNIISSTKNNAKIEFSENNLKKGLVAQEEKEHSVQEQRNISSNSNSGQILQINAFGGSDSSDDDALNDNTQQSDFGSESCSSKIDDLVAHQILSNNHSREEFDSKSLKGIKEERVKDREETQLSCDSEASHSPNFHLHLEEANRGSMEKTKEFMWEDNSDESDFDEEEEEEEEEDEEEDDDDWEHDEVVQQLRLELKNARQGGLATILEEEEDEEIESPKVVEDLMPLKIEEKVQFKDHIIEIQKVYRCYAEKIRKLDIINYQTMHAIGLLQLQDPLKLMLIPKSTVQSAKPLLSQNLWPRKALKQISDPIVKFIEELHGDLELVYVGQVCLSWEILCWQHNKVEELKQYDSQWPRSYNIVAGEFQLFQVLMQRFLEDEPFQGPRIQNYVKNRCLIRKLLQVPPIKDDNTKDKKIIKLGEEYAIDGERLAHIMKESMRVFWEFVRADKDYGNANSKVLHQTGIDVKDPAISDLLGNVRTQLHKKERKLKDIVRSGNCIVRKFQKHHEEQIQLDQEQLLAQVGLRLVSRVLHMKNLRKDRAKGTRHEIQLCKLLSIAEALWTQAFMMKQRLCYSSSTCEWTYDVFLSFRGEDTRSGFTGNLYRSLCDRGIHTFIDDVELSRGEMITPALFKAIEQSRIAIVVFSENYASSAYCLEELVIILECIMKKGRLVWPVFYGVSPSYVRNQEGSYGEALAKLGERFKNDEERLRKWKLALKEAANLSGFHFMFKHGYEYKFIQTIVEEVSRKINRSPLHVANYPIGLESRVQEVKSLLDVGSNQGVSMVGIYGIGGIGKTTITCALYNCIADQFEGQCFLADIRENSMKYGLVQLQETILSEMVGEKSIKLGSINRGMAVLKSKLQRKKVLLILDDVDKMEQFNALAGDLSWFGYGSKIIVTTRNKHLLHVRGVERTYEAKGLDHKEALELFSWHAFKSNEVGPSYMDVSKRAILYSNGLPLALEIIGSNLCGKTMSEWIAALDTYERIPDEDIQEKLKVSYDGLKRNEKEVFLDIACFFRGYILKDVISLLLQGRGFSPEYVIRVLIDRSLIKIDQCGFVRMHNLVEDMGREIVRQESPSEPGKRSRLWLYEDIVDVLENDKGTETIEVIMLHLPKSKDVRWNGSELKKMTNLKILTIENAYFSRGPEHLPNSLRVLKWWGYPSQSLPPEFDPKRLVMVDLSMSCNFLGKQLEHMKFESLSEMVLRGCRFMKKVPDMSGAQNLMKLCLDHCKNLVEVHDSVGLLDKLTRFTAIGCTNLRFLPHNFKLTSLEHLSLRKCSSLHYLPNILEDMEHIKNLDLCGTAIEELPFSFRKLTGLKYLVLDKCKKLYQIPISILMLPKLERLTAVKCGRHVNLILGKNELASSKPLMKDVRLSYNDLTPVSHSNVEFLDLTASAFKVLPECISQCRFLKYLVMDNCKKLQEIRGVPPKIKYLSAINCTSLNHMSQSMLLNQRLHEGGGTDFSLPGTRIPEWFDHCVVGPSLSFWFRHKFPKMALAVVGVLDQQGSFPTSRFHLVINSIQKLHCNFTVQSKLITYHIFLSDVQLKSYNGELESVYGDDGWNHVEISYVGPMVFPHSCKSKKGIIKWMGVHVYKKKTTVEDVRFTNPRSPKRAYSEVSKSGLNGNFQPLPKRSRLSQGMGIWEASHMKQHEGNSGYHGVSQRLWSAICSIAAPLHVKVLMWNSCQDALPTCEYLFRRKLVDSPLCPICGTVPETIEHVFLFCPWTQPLWFGSDFQWCIDVNTVQSFQLWLCQKLVEINRVYLENASQAFALVGSICWAIWKGRNEFVHEGKPVNPLILRKEKF | 2074 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g01197 | 2074 | MobiDBLite | consensus disorder prediction | 389 | 412 | - | - | |
Cca01g01197 | 2074 | MobiDBLite | consensus disorder prediction | 434 | 460 | - | - | |
Cca01g01197 | 2074 | PANTHER | OS09G0413600 PROTEIN | 138 | 817 | - | - | |
Cca01g01197 | 2074 | PANTHER | OS09G0413600 PROTEIN | 1 | 154 | - | - | |
Cca01g01197 | 2074 | Gene3D | - | 1192 | 1280 | IPR042197 | - | |
Cca01g01197 | 2074 | Gene3D | - | 1021 | 1185 | IPR027417 | - | |
Cca01g01197 | 2074 | Pfam | zinc-binding in reverse transcriptase | 1931 | 2000 | IPR026960 | - | |
Cca01g01197 | 2074 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 848 | 999 | IPR035897 | - | |
Cca01g01197 | 2074 | Pfam | Protein of unknown function (DUF1666) | 597 | 816 | IPR012870 | - | |
Cca01g01197 | 2074 | SMART | till_3 | 856 | 996 | IPR000157 | GO:0007165 | |
Cca01g01197 | 2074 | Pfam | NB-ARC domain | 1038 | 1267 | IPR002182 | GO:0043531 | |
Cca01g01197 | 2074 | MobiDBLite | consensus disorder prediction | 304 | 323 | - | - | |
Cca01g01197 | 2074 | Gene3D | Ribonuclease Inhibitor | 1372 | 1726 | IPR032675 | - | |
Cca01g01197 | 2074 | ProSiteProfiles | TIR domain profile. | 855 | 1023 | IPR000157 | GO:0007165 | |
Cca01g01197 | 2074 | SUPERFAMILY | L domain-like | 1350 | 1721 | - | - | |
Cca01g01197 | 2074 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1023 | 1286 | IPR027417 | - | |
Cca01g01197 | 2074 | Pfam | TIR domain | 857 | 1026 | IPR000157 | GO:0007165 | |
Cca01g01197 | 2074 | SUPERFAMILY | "Winged helix" DNA-binding domain | 1263 | 1370 | IPR036390 | - | |
Cca01g01197 | 2074 | MobiDBLite | consensus disorder prediction | 328 | 356 | - | - | |
Cca01g01197 | 2074 | Gene3D | - | 853 | 1020 | IPR035897 | - | |
Cca01g01197 | 2074 | PRINTS | Disease resistance protein signature | 1227 | 1241 | - | - | |
Cca01g01197 | 2074 | PRINTS | Disease resistance protein signature | 1134 | 1148 | - | - | |
Cca01g01197 | 2074 | PRINTS | Disease resistance protein signature | 1536 | 1552 | - | - | |
Cca01g01197 | 2074 | PRINTS | Disease resistance protein signature | 1058 | 1073 | - | - | |
Cca01g01197 | 2074 | MobiDBLite | consensus disorder prediction | 430 | 460 | - | - | |
Cca01g01197 | 2074 | PANTHER | DUF1666 FAMILY PROTEIN | 138 | 817 | - | - | |
Cca01g01197 | 2074 | PANTHER | DUF1666 FAMILY PROTEIN | 1 | 154 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g01197 | Cca-Chr1 | 19215392 | 19232806 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g01197 | 857 | 1691 | WRKY Transcription Factor Family | AT4G12020 | 32.908 | 3.07e-91 | 328 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g01197 | - | - | gmx:100810811 | 2057.72 |