Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01192 ATGGAGAGCCAAAGCCAACCCCAAGTTTCAAATTCAAGCCAAAACACTGAAGGAACCACCTTCTTCAGAACTTGTCTCAATGTGATCAACACCTTGGCAGGTATTGGGATACTCTCAATGCCATATGCAGTTTCTCAAGGAGGGTGGTTCAGTTTTATTTTGCTCCCCATTTTTGCACTGATATGCTGGTACACGGCATTACTTCTAGAGAGATGCATGAACAAGCATCCAATAATCAAATGCTACCCTGACTTAGGTGAGATTGCTTTTGGATACAAAGGAAGAGCAGTAATAGCTACAATCATCTACGTCAACCTATTTTTAGTTGCAGTTGAGCTTCTGATATTGGAAGGTGACGGTCTGCAAAAGTTGTTTCCAAACAAGAACTTCAACTTAGGTAGTCTGAAAATTCAAGGTAGAAAGGCTTTTGTCATGTTAGCTGCTGTGGGGGTACTTCCAACAACATGGTTGAAAAGCATGGGAGCTTTGGCCTATGTTTCTTTTAGTGGGGTGGTAGCTTCTATTGTTTTAATTGCTTGTGTTGTGTGGGTGGGTGAAGTTGATGGTGTGGGGTTTCATGAAAGAGGCCATTTAGTGAATTGGGAGGGATTGCCTACTTCTGTGAGCCTTTTTGCCTTCTGTTTCTGTGCACATGCAGTCATGCCTGCACACTGTAGTTCTATGAAGGATAAAAGTGAATTTTCTAAGGTTTTGATGGTTTGTTTTGTGGCAGCAACTATTACCTATGGATTCATTGCTATTGTAGGCTACACAATGTTTGGAGATTATTTGATGTCTAATATAACCTTAAATCTACCTTCAAAGAAGATAAGTACTAAAATAGCAATTATTTCCACAGTGATCAATCCTTTTACTAAGTATTGTCTTCTAATCATCCCAATAGCAGATGTTATCGAGAACAAATGGCTTTTCTGCAAGAAAAAGCCTATTTCCATTTTGATAAGAACAACTTTGGTGGTTGGCACTGTGCTTATGGCCCTATTCATGCCCTTTTTTGGATACATTATGGCGTTTATTGGTGCATCTTTTAGTGTGGCAATCTCATTGTTGTTCCCCTGTATCTGCTACCTAAAGATAAACAAAGCTGCTAGACAATTTGGGTGGGAGTTTATTGTCATCATTGTAATTCTTATCATAGGTACATTTATTGGAATACTGGGTACCTATCTCTCAATGAAGAACATAGTGAATCATCTATAG 1221 0.3915 MESQSQPQVSNSSQNTEGTTFFRTCLNVINTLAGIGILSMPYAVSQGGWFSFILLPIFALICWYTALLLERCMNKHPIIKCYPDLGEIAFGYKGRAVIATIIYVNLFLVAVELLILEGDGLQKLFPNKNFNLGSLKIQGRKAFVMLAAVGVLPTTWLKSMGALAYVSFSGVVASIVLIACVVWVGEVDGVGFHERGHLVNWEGLPTSVSLFAFCFCAHAVMPAHCSSMKDKSEFSKVLMVCFVAATITYGFIAIVGYTMFGDYLMSNITLNLPSKKISTKIAIISTVINPFTKYCLLIIPIADVIENKWLFCKKKPISILIRTTLVVGTVLMALFMPFFGYIMAFIGASFSVAISLLFPCICYLKINKAARQFGWEFIVIIVILIIGTFIGILGTYLSMKNIVNHL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01192 406 Pfam Transmembrane amino acid transporter protein 18 396 IPR013057 -
Cca01g01192 406 PANTHER OS05G0424000 PROTEIN-RELATED 15 404 - -
Cca01g01192 406 PANTHER OS06G0228500 PROTEIN 15 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01192 Cca-Chr1 18929423 18934469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01192 1 403 Amino Acid or Auxin Permease AAAP Family AT3G28960 42.611 3.11e-126 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01192 K15015 - gmx:100812006 601.282