Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01191 ATGTACGTATGGACAACCAAGTTTGCTTTACCACAGAATATGGAGAGCCAAAGCCAACTCCAAGTTTCAAACTCGGAGCAACACCAAAAGGGCACCACCTTCTTCAAAACTTGTTTCAATGGAATCAACTCCCTCACAGGTATTGGGATACTCTCAATGCCATATGCAGTTTCTCAAGGAGGGTGGTTGAGTTTTATTCTGCTGCTTGTTTTCACAATGATATTTTGGTACACAGCTTTGCTGCTACAAAGGTGTATGATTAAGCATCCACTAATCAAATCATACCCTGATATAGGCGAGGTTGCTTTTGGGTACAAAGGAAGAACAGTGATAGCTGCATTCATATATGCAGAGCTGTTTCTAATTGCTGTGGAGCTTCTGATATTGGAAGGTGACAATTTGGCGAAGTTGTTTCCAAACATGAACTTGAAACTTGGTGGTGTTAGAATTGAAGGTAGAAAGAGTTTTGTGCTGCTGGCTGCTTTGATCATACTGCCAACAACGTGGTTGAGAAGCATGGGAGCTTTGGCCTACGTTTCTTTTGGTGGGGTAGTGGTTTCTATTATTTTAATCGGTTGTGTTGCGTGGGTGGGTGAAGTTGATGGTGTGGGGTTTCATGAAAGAGGACAGTTAGTGAATTGGGAGGGACTGCCTACTGCTATGAGCCTTTATGCATTCTGTTACTGTGCACATGCAGTCATGCCCACTCTTATCAATTCAATGAATGATAGAAGTCAGTTTAGCAAGGTTTTGGTGGTTTGCTTTGTGACAACTACTATGATCTATGGAGTCATTGCTGTTTTAGGTTACACAATGTTCGGAGATTATTTGATGTCTCAAATAACCTTAAATCTGCCATCAAAGAAATTAAGTACTAAAATAGCTATTTATACCACATTAATTAATCCTTTCACTAAGTATGCTGTTCTAATCACCCCAATAGCAAATGCTATCGAGGACAGATGGCTTCTGTGCAAGAGAAAGTCCATTGCCATCCTCGTTAGAACAACCATCGTGGTCAGCACTGTGGTTATGGCTCTATTCATGCCGTTTTTTGGTTATATTATGGAACTAATTGGTGCATTTTTTAGTGTAACAATGTCATTATTATTCCCTTGCCTTTGTTACCTACAGATAAACAAATCTGTTCGGCAACTTGGATCGGAGTTGATCATTATAATTGTAATTCTTCTCATAGGTACTTTCATTGGAATAATGGGTACCTATCTCTCTGTAAAGAACATAGTGAATCATCTATAG 1260 0.3968 MYVWTTKFALPQNMESQSQLQVSNSEQHQKGTTFFKTCFNGINSLTGIGILSMPYAVSQGGWLSFILLLVFTMIFWYTALLLQRCMIKHPLIKSYPDIGEVAFGYKGRTVIAAFIYAELFLIAVELLILEGDNLAKLFPNMNLKLGGVRIEGRKSFVLLAALIILPTTWLRSMGALAYVSFGGVVVSIILIGCVAWVGEVDGVGFHERGQLVNWEGLPTAMSLYAFCYCAHAVMPTLINSMNDRSQFSKVLVVCFVTTTMIYGVIAVLGYTMFGDYLMSQITLNLPSKKLSTKIAIYTTLINPFTKYAVLITPIANAIEDRWLLCKRKSIAILVRTTIVVSTVVMALFMPFFGYIMELIGAFFSVTMSLLFPCLCYLQINKSVRQLGSELIIIIVILLIGTFIGIMGTYLSVKNIVNHL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01191 419 Pfam Transmembrane amino acid transporter protein 31 409 IPR013057 -
Cca01g01191 419 PANTHER OS06G0228500 PROTEIN 28 417 - -
Cca01g01191 419 PANTHER OS05G0424000 PROTEIN-RELATED 28 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01191 Cca-Chr1 18802060 18804980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01191 15 416 Amino Acid or Auxin Permease AAAP Family AT3G28960 46.667 2.43e-140 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01191 K15015 - gmx:100812006 674.855