Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g01122 | ATGAGATCGGGGTTTGATCTCTTTGAGTGCTGCTTCACTAGCACATCTTCTGACTCAATTCCAAAAGAGCACAGTTTGTTCAAGTGGCGAATCTTCCCCTACAAGAAACTTGCGAAATTCACAAATAATTTTGATCAATCACATTGTGTTGGAAAGAAGGGGTCTATCACTGAATATTACGGAAAACTTGAGGATGGACGTGAGATTACAGTCCAGTGCTTTAAGGAAGACAAGCGCTACATATTGCAACAGTTTATCAATGAAACTGTTATCCTAAATTACTTGCCTCACAAAAACATTGTGTCAATTTACGGCTGTGCTTTTCATCACAAGGAATCCCTGCTAGTGCACGAATACCAATCTAATGGAAATCTTGCTGCTTATCTTCAAAGTGAGAAGGCCGAAAACAACACATTACCTTGGCATACCAGATTGGATATAGCTATAGATATTGCAAATGCATTGAACTATCTTCACTGTTATGGCATCATCCACCGCAATGTGAAGTCCAGCAATATTCTCCTAGATGTGAACTTTTGTGCTAAAGTTGCTAACCTTCATTTATCACGGAAACTTCCAGATGGAGTTCCTGTCTATGCCACCCCTGTTACAAGTGATATGATTGGGACATGTGGGTATGTAGACCCAGAGTTGATAAATGGCCGGCTTAGTGTCAAAAATGATGTTTATAGCTTTGGGGTGGTGTTGTGTGAGCTGCTATCATCGGTGCTGGCAAAATACTTGGTTCTGAATGAAGAGGGTAATCTTGCTAACATTTTAAGCAGAAAAATTGAAAATCAAGCTTTGGTGGAGTTGTTTGATCCAAGACTTGGCTTCCATTCAAACCTTAAGACCAAGCAGATGATGATTGCTACAGCTGAGCTTGCACTTCTCTGCATGAAATGTCCACAAGAATTAAGGCCAAACATGGAACAAGTGCTAGAGATTCTCAATAGCATAAAGCCAGGGAGATACCAAACAAATTCTTACTCAACAAAAGCTTTAAAAATCTTCCAGTATGCTGAACTTGAAGAAGCTAGTAACAGTTTCGATAATTGCCTTGGAATGGGAGGGTATAGCAGCGTGTACTATGGAAAACTTAAAGATGGGCGAGAGGTTGCAATAAAATGTTTCCATGACGAGAACAAGAGAGAAGAGACCATTAAGCAATTCATGAAAGAAACCGAGATCTTAGGTCTCTTGCACCATCAAAATCTGGTTTCACTTTATGGCCGCACTTCTCGCCATAGCAACAAACACATGCTAGTGTACGAGTATATCTCTAATGGCACTCTTTCTAAACATCTTCATGAATCTTCCAGTGGTAAACTACCATGGCATACTAGGTTAAATATTGCCATTGAAACTGCAGCTGCATTGGTATATCTCCATGACTCAGGTTTCATCCACCGCGATGTAAAAGGGAGTAATATTCTGTTGGATGAAGATTTTACTGTTAAAGTTGCAGATTTTGGATTCTCACGGTCTCTTCCAGATCATGTTACTCATGTTTCAACTAATCCAGTAGGAACTCGTGCTTACATGGATCCTGACTACTTTGAATCTGGAAGGGTCAGTGACAAAAGTGATGTGTATGGATTTGGGGTGGTCTTGTTTGAACTCATATCATCCATCCCCCCAGGTTCAATGGAAGGCACAAATTATGTTACTCTTGCACATTTTGCAAAGAGAAAAATCTTAAACAAGGAATTAAAGGAGGTAGTGGATCCAAGTTTTTGGTTTGCTTCAGATAAAATCACGATGGAAATGGTAACAGCTGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCAAAGGAATTCAGACCATCCATGAAACAGGTGCTAGATACCCTAGAGGGCATAAGGAAGGGAACATGGGGATTCAACCAGATAACATAG | 1902 | 0.4033 | MRSGFDLFECCFTSTSSDSIPKEHSLFKWRIFPYKKLAKFTNNFDQSHCVGKKGSITEYYGKLEDGREITVQCFKEDKRYILQQFINETVILNYLPHKNIVSIYGCAFHHKESLLVHEYQSNGNLAAYLQSEKAENNTLPWHTRLDIAIDIANALNYLHCYGIIHRNVKSSNILLDVNFCAKVANLHLSRKLPDGVPVYATPVTSDMIGTCGYVDPELINGRLSVKNDVYSFGVVLCELLSSVLAKYLVLNEEGNLANILSRKIENQALVELFDPRLGFHSNLKTKQMMIATAELALLCMKCPQELRPNMEQVLEILNSIKPGRYQTNSYSTKALKIFQYAELEEASNSFDNCLGMGGYSSVYYGKLKDGREVAIKCFHDENKREETIKQFMKETEILGLLHHQNLVSLYGRTSRHSNKHMLVYEYISNGTLSKHLHESSSGKLPWHTRLNIAIETAAALVYLHDSGFIHRDVKGSNILLDEDFTVKVADFGFSRSLPDHVTHVSTNPVGTRAYMDPDYFESGRVSDKSDVYGFGVVLFELISSIPPGSMEGTNYVTLAHFAKRKILNKELKEVVDPSFWFASDKITMEMVTAVAELAFQCVQCPKEFRPSMKQVLDTLEGIRKGTWGFNQIT | 633 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g01122 | 633 | SMART | serkin_6 | 348 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca01g01122 | 633 | SMART | serkin_6 | 44 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca01g01122 | 633 | ProSiteProfiles | Protein kinase domain profile. | 348 | 622 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca01g01122 | 633 | Pfam | Protein tyrosine and serine/threonine kinase | 350 | 618 | IPR001245 | GO:0004672|GO:0006468 | |
Cca01g01122 | 633 | Pfam | Protein tyrosine and serine/threonine kinase | 63 | 315 | IPR001245 | GO:0004672|GO:0006468 | |
Cca01g01122 | 633 | SUPERFAMILY | Protein kinase-like (PK-like) | 18 | 317 | IPR011009 | - | |
Cca01g01122 | 633 | Gene3D | Transferase(Phosphotransferase) domain 1 | 120 | 322 | - | - | |
Cca01g01122 | 633 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 468 | 480 | IPR008271 | GO:0004672|GO:0006468 | |
Cca01g01122 | 633 | SUPERFAMILY | Protein kinase-like (PK-like) | 326 | 623 | IPR011009 | - | |
Cca01g01122 | 633 | PANTHER | TYROSINE KINASE FAMILY PROTEIN | 28 | 633 | - | - | |
Cca01g01122 | 633 | Gene3D | Transferase(Phosphotransferase) domain 1 | 427 | 627 | - | - | |
Cca01g01122 | 633 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 28 | 633 | IPR044652 | - | |
Cca01g01122 | 633 | ProSiteProfiles | Protein kinase domain profile. | 44 | 320 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca01g01122 | 633 | ProSitePatterns | Protein kinases ATP-binding region signature. | 354 | 376 | IPR017441 | GO:0005524 | |
Cca01g01122 | 633 | Gene3D | Phosphorylase Kinase; domain 1 | 323 | 426 | - | - | |
Cca01g01122 | 633 | Gene3D | Phosphorylase Kinase; domain 1 | 15 | 119 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g01122 | Cca-Chr1 | 17043429 | 17047656 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g01122 | 335 | 623 | Receptor kinase-like Gene Family | AT1G25390 | 52.203 | 1.69e-89 | 289 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Cca01g01122 | PK_Tyr_Ser-Thr | 2.5e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g01122 | - | - | gmx:100801413 | 1047.73 |