Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01114 ATGTCCTCGGAGAAGGAGAGAGAGACCCAAGTTTACTTGGCCAAGCTCTCTGAGCAAGCCGAGAGATATGAAGAAATGGTTGAATGCATGAAGTCAATAGCAAAACTTGATCTAGAGCTGACAGTGGAAGAGAGGAACCTGCTCTCGGTGGGATACAAAAATGTGATTGGTGCGCGTCGAGCCTCATGGCGCATTATGTCTTCAATTGAACAAAAGGAAGAGTCTAAAGGAAATGAGAACAATGCGAAACTTATCAAGAATTATCGCAAAAAGGTTGAAGAGGAACTATCCAAAATTTGCGGTGACATTCTTCAAATTATTGACCAGCATCTCGTTCCTAATTCCACCTCAGGAGAAGCTACTGTTTTCTACTGTAAAATGAAAGGTGACTATTATCGATATCTAGCTGAGTTCAAGACCGACCAAGAAAGAAAGGAGGCAGCTGAGCAATCACTAAAGGGATATGAGGCTGCTTCAGCCACTGCAAACACAGAGCTTCCATCAACACATCCAATCCGTCTTGGACTTGCACTCAACTTCTCAGTCTTCTATTATGAAATAATGAACTCTCCCGAAAGGGCCTGTCATTTGGCTAAACAAGCTTTCGATGAGGCAATTGCGGAGTTAGACACCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGCTGAGAGACAACCTGACTCTCTGGACCTCCGATTTACCTGAGGATGGAGGTGACGAAATCAAAACAGAAGAAGCCAAACCTGCAGAACCTGAGAACTGA 777 0.4389 MSSEKERETQVYLAKLSEQAERYEEMVECMKSIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNAKLIKNYRKKVEEELSKICGDILQIIDQHLVPNSTSGEATVFYCKMKGDYYRYLAEFKTDQERKEAAEQSLKGYEAASATANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDEIKTEEAKPAEPEN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01114 258 MobiDBLite consensus disorder prediction 237 258 - -
Cca01g01114 258 Coils Coil 13 33 - -
Cca01g01114 258 MobiDBLite consensus disorder prediction 240 258 - -
Cca01g01114 258 Pfam 14-3-3 protein 13 235 IPR023410 -
Cca01g01114 258 Coils Coil 195 215 - -
Cca01g01114 258 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Cca01g01114 258 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Cca01g01114 258 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Cca01g01114 258 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Cca01g01114 258 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Cca01g01114 258 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Cca01g01114 258 PIRSF 14-3-3 1 247 IPR000308 -
Cca01g01114 258 PANTHER 14-3-3 PROTEIN 3 249 IPR000308 -
Cca01g01114 258 Gene3D - 1 247 IPR036815 -
Cca01g01114 258 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Cca01g01114 258 SMART 1433_4 7 248 IPR023410 -
Cca01g01114 258 PANTHER BNAC03G57490D PROTEIN 3 249 - -
Cca01g01114 258 Coils Coil 145 165 - -
Cca01g01114 258 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Cca01g01114 258 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01114 Cca-Chr1 16858434 16863411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01114 3 255 14-3-3 family AT1G26480 85.328 6.79e-163 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01114 - K06630 gmx:100815948 480.33