Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01092 ATGAACCTGGGGCCTCGAATCCTCCTCATTGCTCTCGTGCTCGTGTTCTGCGCCCCATTCTCCTCTTCTTCCAAACCCAAGAACCCGCTCCTCGGAATCGCCCCCGAAGATGAGAAGTATTACACGTCTTCCGATGTAATACGATGTAAAGACGGATCCGGGAAATTCAACAAGCCGCAGCTCAATGATGACTTTTGCGATTGCGCTGATGGCACCGATGAGCCTGGTACATCGGCGTGTCCGGGTGGGAAATTTTATTGTCGGAATGCAGGACATGTTCCTGTTTACTTGTTTTCATCTAGAGTGAATGATGGAATTTGCGATTGCTGTGATGGAACGGATGAATATGATGGTCAAGTAAAGTGTCCCAATACCTGCTGGGAGGCTGGGAATGTTGCTCGAGATAGGCTGAAAAAAAAGATTGCCACTTATCAAGAGGGTGCCAAATTGCGAAAGCAAGAAATTGAACAAGCTAAAGTAGCTATGGAGAAGGACGAAGCAGAACTTTCAAAATTAAAAAGGGAAGAAAGTATACTTAAAGGGATTGTGAAACAGCTAAAGGATCATAAAGAACTAATAGAAAAGGCAGAGGAGAAGGAACGATTACAGAAAGAAAAAGAAGAGAAGCAGAAAAAGCAGTCTGAGGAGAAGGCTAATGAAGCAAAAGATACAGCTGATGAAGATATGGGTCATAGAGATGAAACTGGAAAGCATTCGGATATTGAAGACAATGTTGTGGAAAATAATCATGATAAAATAGAAAATCTAGAGGGTTCTCCTGCAGATCAGGATGAAGCAGCAGAGAAATTAGCAGATGTACTTGATAATGATGATGAAGCCAGTGGTAGTCTTGGAAGTGCAGGATCTTTGCTTAATAAAGTGGAAGAGAATGCAAATGAAGCTGAGGAAGAACCGACTGTTAAATCTGAAAATGATTTGAAGGTCGGAAACAAAGAGTCTTCAGATGAAATCATCAATACGGGGAATGATATATCTGAAAATACTGAGGGATTATCAAGAGAAGAGTTGGGCCGGCTTGTTGCTTCACGTTGGACAGGAGAAAATACTGATAAGCAAAGTGCTGAGCCTGATACGACATTAGACAATGAGGAGCATGAAGATCTTCCAAAGGGGACAAATACTGAGGAGTATGAAGGCTATGCTTCTGAAACTGATGATGAAAGCCATAAATATGATGatgaagatgaaaatgaaaatgaaaatgaaaatgaTGAAGAATATCGAGAGGATGAGCATGATGACTTGGGTTCCTCCTACAAATCAGATTCTGATACTGAACCAGACTTGTCAGATAATCCTTCTTGGTTAGAGAAAATACAGAGAGCTGTACTGAATATTTATCAGGCTGTTAATTTATTCCAGGCACCGGTGAACCAGACAGATGCTGCTCGTGTACGCAAGGAATATGACGAATCAAGTGCCAAGTTGACTAAAATACAGTCTAGAATATCGAGTCTGACACAAAAGCTAAAACATGATTTTGGTCCAGCAAAGGAGTTTTATTCATTCTATGATCATTGCTTTGAGGGAAAGGAGAACAAGTACACTTACAAAGTCTGCCCTTATAAACAGGCTTCTCAGGAGGAGGGCTATTCCACCACCCGTTTGGGGCGCTGGGACAAATTTGAGGATTCATACAAAGTAATGGTGTTTTCGAATGGTGATAAATGCTGGAATGGTCCTGATAGGAGTTTGAAGGTCAAGCTAAGATGTGGGTTGAAAAATGAGATTACTGACGTAGATGAACCGAGCCGTTGCGAATATGTAGCTTTATTATCTACCCCAGCCCTGTGTCAAGAGGAAAAGCTGAAGGAATTACAACACAAGCTAGACTTACTGAATTCTGAACAACCAGAAAAACATGACGAGTTGTAA 1896 0.4103 MNLGPRILLIALVLVFCAPFSSSSKPKNPLLGIAPEDEKYYTSSDVIRCKDGSGKFNKPQLNDDFCDCADGTDEPGTSACPGGKFYCRNAGHVPVYLFSSRVNDGICDCCDGTDEYDGQVKCPNTCWEAGNVARDRLKKKIATYQEGAKLRKQEIEQAKVAMEKDEAELSKLKREESILKGIVKQLKDHKELIEKAEEKERLQKEKEEKQKKQSEEKANEAKDTADEDMGHRDETGKHSDIEDNVVENNHDKIENLEGSPADQDEAAEKLADVLDNDDEASGSLGSAGSLLNKVEENANEAEEEPTVKSENDLKVGNKESSDEIINTGNDISENTEGLSREELGRLVASRWTGENTDKQSAEPDTTLDNEEHEDLPKGTNTEEYEGYASETDDESHKYDDEDENENENENDEEYREDEHDDLGSSYKSDSDTEPDLSDNPSWLEKIQRAVLNIYQAVNLFQAPVNQTDAARVRKEYDESSAKLTKIQSRISSLTQKLKHDFGPAKEFYSFYDHCFEGKENKYTYKVCPYKQASQEEGYSTTRLGRWDKFEDSYKVMVFSNGDKCWNGPDRSLKVKLRCGLKNEITDVDEPSRCEYVALLSTPALCQEEKLKELQHKLDLLNSEQPEKHDEL 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01092 631 PANTHER BNACNNG14010D PROTEIN 8 631 - -
Cca01g01092 631 MobiDBLite consensus disorder prediction 198 276 - -
Cca01g01092 631 MobiDBLite consensus disorder prediction 296 319 - -
Cca01g01092 631 Gene3D - 507 605 IPR009011 -
Cca01g01092 631 Coils Coil 179 224 - -
Cca01g01092 631 MobiDBLite consensus disorder prediction 419 434 - -
Cca01g01092 631 ProSiteProfiles MRH domain profile. 512 607 IPR044865 -
Cca01g01092 631 MobiDBLite consensus disorder prediction 395 418 - -
Cca01g01092 631 MobiDBLite consensus disorder prediction 320 334 - -
Cca01g01092 631 Coils Coil 603 623 - -
Cca01g01092 631 Coils Coil 148 175 - -
Cca01g01092 631 MobiDBLite consensus disorder prediction 361 380 - -
Cca01g01092 631 Coils Coil 284 304 - -
Cca01g01092 631 MobiDBLite consensus disorder prediction 198 439 - -
Cca01g01092 631 Pfam Glucosidase II beta subunit-like protein 473 630 IPR036607 -
Cca01g01092 631 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 8 631 IPR039794 -
Cca01g01092 631 SUPERFAMILY Mannose 6-phosphate receptor domain 512 605 IPR009011 -
Cca01g01092 631 Pfam Glucosidase II beta subunit-like 25 173 IPR028146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01092 Cca-Chr1 16466277 16476154 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01092 21 631 Calmodulin-binding Proteins AT5G56360 59.171 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01092 K08288 - gmx:100807083 1060.83