Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01076 ATGGCCACTTCACTAACCCTTTTGAAGACGATCTTTATTGTCTTCATTGTCATCACTCTTCTCACACACCAAGCCGTGGCTGATTGTGAATCCGAATCTTCAAACAGTTGCAACAACAAAAGGAAAGCCCTGCCACTAAAAATCATAGCAATCTTCACCATCTTGATCTCTAGTGTAATCGGTGTGAGCTTGCCCTTGGTGACACGTTCGGTGCCAGCTTTGAGACCAGAAAACGACCTCTTCATAATAGTGAAGTGCTTCGCAGCTGGTATCATTCTTGGCACGGGGTTCATGCACGTGCTTCCTGATTCATTTGACATGTTGGGGTCTGATTGCTTGGAGAAGAAACCATGGCACGAGTTTCCGTTTTCGGGGCTCGTGGCTATGTTTTCTGCGATAATCACGATGATGGTGGACTCTTTGGCCACTAGTGTTTATACCAAGAAGTTTAGGACTGAGGTTACTCCTGCTGCTGAGACCAACCATGCAGGTGGGTTTACATGGGACCAAGAGATCGGTGCTGTCACCTATGGACATTTTCATGGTCACCACCATGCTGCAGAGACCAAGGTGGCAGAAGGCACGGAATGGCAGCAGCTTCTACGTTATCGTGTTGTTGCCATGGTACTAGAACTTGGAATTGTTGTTCATTCAATAGTGATAGGACTTGGCATGGGAGCCTCAAACAACACATGCACCATAAGAGGTCTCATAGCCGCCCTTTGCTTCCACCAAATGTTCGAAGGCATGGGTCTTGGCGGGTGCATTCTTCAGGCCGAGTACAAGTTCTTAAAGAAGGCCATAATGGTGTTCTTTTTCTCCGTTACAACCCCATTTGGAATTGCCCTAGGAATTGCAATGTCCACAACCTACAAAGAGAACAGCCCAAGTGCACTAATCACCGTGGGATTGCTGAATGCATCTTCAGCTGGTCTTTTAATCTACATGGCTTTGGTTGATCTTCTCTCTGCTGATTTCATGAGTCCAAGGTTGCAGGGTAGCGTTAAGCTTCAATTGAAATCTTACGTAGCTGTGTTTTTGGGTGCTGGTGGCATGTCTCTCATGGCAAAATGGGCTTAA 1080 0.4657 MATSLTLLKTIFIVFIVITLLTHQAVADCESESSNSCNNKRKALPLKIIAIFTILISSVIGVSLPLVTRSVPALRPENDLFIIVKCFAAGIILGTGFMHVLPDSFDMLGSDCLEKKPWHEFPFSGLVAMFSAIITMMVDSLATSVYTKKFRTEVTPAAETNHAGGFTWDQEIGAVTYGHFHGHHHAAETKVAEGTEWQQLLRYRVVAMVLELGIVVHSIVIGLGMGASNNTCTIRGLIAALCFHQMFEGMGLGGCILQAEYKFLKKAIMVFFFSVTTPFGIALGIAMSTTYKENSPSALITVGLLNASSAGLLIYMALVDLLSADFMSPRLQGSVKLQLKSYVAVFLGAGGMSLMAKWA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01076 359 TIGRFAM zip: ZIP zinc/iron transport family 29 359 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cca01g01076 359 PANTHER ZINC TRANSPORTER 10-RELATED 19 359 - -
Cca01g01076 359 Pfam ZIP Zinc transporter 46 356 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cca01g01076 359 PANTHER ZINC/IRON TRANSPORTER 19 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01076 Cca-Chr1 16113023 16116555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01076 24 359 Inorganic Solute Cotransporters AT1G31260 65.000 1.12e-158 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01076 K14709 - gmx:100801759 585.104