Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01069 ATGGCGAGGTTGAAGGTGTTGTCAGCCCTAGACACAGCGAGGACACAATACTACCACTTCAAGGCCATCATCATTGCAGGGATGGGGCTCTTCTCCGACGCCTACGACCTTTTCTCCATCACTCTCATCATCAAGATGATCGGAAGGATATACTACAAAGACCGGGGGAACCAGACGCCGCCGGTGGTCGCCTCCGCCTTGGTCGCCGTGGCGCTGTTCGGCACCGCCATCGGCCAACTCGTGTTCGGAAGACTCGGTGACCTCAAGGGGCGGCGGCGCGTGTACGGATTTGCCTTGCTGTTGATGGTGTTCGGCTCCTTGGCCTCTGGCTTCTCCATTTGCAGAAAAAGAACCTGCGTTCTCCTCTCCCTTGGCTTCTTCAGGTTTGTGTTGGGGCTGGGGATCGGGGGAGACTACCCATTGTCTTCTACCATAATGTCTGAGTTTGCAAACAAAAAGACACGAGGATCGTTCATAGCAGCGGTGTTTTCAATGCAAGGGTTCGGCATATTGGCCAGTTCCACCGTGACGATAGTTGTGTGTTCTATATTCCGAGGAGCATCAGCTTCAGAGGATGACGCTGACGTTGCATGGAGGTTAATACTCATGCTAGGTTCCGTTCCAGCAGCCATGACTTATTACTGGCGCATGATGATGCCTGAAACTGCCAGATACACAGCGTTAGTGGAGCAAAATGTGATTCAAGCAGCAAAGGACATGGAGAAAGTGCTGGATGTAGAACTGAGCCTGATTGCTGAAGAACATCCTCTGCCACCAACCGCACATCCATACTCTCTCCTTTCGAGGGAATTCCTCGGTCGCCACGGTCGTGACCTTTTCGCTTGTTCTTCAACTTGGTTTCTATTGGACATCGTTTTCTACAGCCAAGTTTTGTTCCAAAGTGAAATATACGACATCTTCTACCTTAACAAAGACAAAAACGAGGATATTAATGTCTACAAAGAGGCTTTCCACGTTGCATGGATCCAAACCGTAATCGCAGCGTGTTCCACCATCCCTGGCTACTTTTTCTCCGTCTACTTCATTGATAAATGGGGCAGAGTCAAAATCCAAATAATGGGCTTTTTCTTCATGGCTTTGGCCTTTTTCGCCATTGGGATTCCCTATTACTCATTTTGGACTGACGAGGATCACAAACATAGTGAAGGGTTCATGATCTTGTATGGGCTTGCTTTCTTCTTTGCCAACTTTGGGCCCAACACCACGACTTTCATTGTCCCAGCTGAGCTTTTCCCAGCCAGGTTTAGGTCCACGTGTCATGGCATTTCTGGGGCAATGGGCAAGGCTGGGGCAATCATTGGATCTGTTGGGTTTCTTTGGGCCTCACATAATAAGGAGGAGGAGGGGTACCCCAAGGGAATTGGGATGACAGCTTCCCTTATCATACTTGGAGGGGTGTGCATTGTGGGAATGGTGATCACCTACTTTTTCACTAGGGAAACCATGGGAATGTCTTTGGAAGAGAATGAGGTGGAGAGTGTGGCCCATGAAGTTGCAGAGTATCACAATCTTTGA 1536 0.4941 MARLKVLSALDTARTQYYHFKAIIIAGMGLFSDAYDLFSITLIIKMIGRIYYKDRGNQTPPVVASALVAVALFGTAIGQLVFGRLGDLKGRRRVYGFALLLMVFGSLASGFSICRKRTCVLLSLGFFRFVLGLGIGGDYPLSSTIMSEFANKKTRGSFIAAVFSMQGFGILASSTVTIVVCSIFRGASASEDDADVAWRLILMLGSVPAAMTYYWRMMMPETARYTALVEQNVIQAAKDMEKVLDVELSLIAEEHPLPPTAHPYSLLSREFLGRHGRDLFACSSTWFLLDIVFYSQVLFQSEIYDIFYLNKDKNEDINVYKEAFHVAWIQTVIAACSTIPGYFFSVYFIDKWGRVKIQIMGFFFMALAFFAIGIPYYSFWTDEDHKHSEGFMILYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAMGKAGAIIGSVGFLWASHNKEEEGYPKGIGMTASLIILGGVCIVGMVITYFFTRETMGMSLEENEVESVAHEVAEYHNL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01069 511 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 499 - -
Cca01g01069 511 ProSitePatterns Sugar transport proteins signature 2. 130 155 IPR005829 GO:0016021|GO:0022857|GO:0055085
Cca01g01069 511 Gene3D MFS general substrate transporter like domains 18 510 IPR036259 -
Cca01g01069 511 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 489 IPR020846 GO:0022857
Cca01g01069 511 Pfam Sugar (and other) transporter 24 497 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca01g01069 511 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 2 499 - -
Cca01g01069 511 CDD MFS_PhT 23 488 - -
Cca01g01069 511 SUPERFAMILY MFS general substrate transporter 10 497 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01069 Cca-Chr1 15887616 15893955 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01069 1 502 Inorganic Solute Cotransporters AT1G76430 61.686 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01069 K08176 - gmx:100797683 855.514