Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01065 ATGTCTAGAGCCAACACCACGACTTTCATTGTCCCAGCTGAGCTTTTCCCAGCCAGGTTTAGGTCCACGTGTCATGGCATTTCTGGGGCAATGGGCAAGGCTGGGGCAATCATTGGATCTGTTGGGTTTCTTTGGGCCTCACATAATAAGGAGGAGGAGGGGTACCCCAAGGGAATTGGGATGACAGCTTCCCTTATCATACTTGGAGGGGTGTGCATTGTGGGAATGGTGATCACCTACTTTTTCACTAGGGAAACCATGGGAATGTCTTTGGAAGAGAATGAGGTGGAGAGTGTGGCCCATGAAGTTGCAGAGTATCACAATCTTTGA 330 0.4939 MSRANTTTFIVPAELFPARFRSTCHGISGAMGKAGAIIGSVGFLWASHNKEEEGYPKGIGMTASLIILGGVCIVGMVITYFFTRETMGMSLEENEVESVAHEVAEYHNL 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01065 109 Pfam Sugar (and other) transporter 7 95 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca01g01065 109 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 87 IPR020846 GO:0022857
Cca01g01065 109 Gene3D MFS general substrate transporter like domains 2 108 IPR036259 -
Cca01g01065 109 SUPERFAMILY MFS general substrate transporter 4 95 IPR036259 -
Cca01g01065 109 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 3 97 - -
Cca01g01065 109 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01065 Cca-Chr1 15850454 15850783 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01065 5 100 Inorganic Solute Cotransporters AT1G76430 69.792 2.30e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01065 K08176 - gmx:100797683 180.259